Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01475 ATGGCTTACTCTAAAATTATCTTTCTCTCTATCCTTGTTAGATTCCTCACTTTTGCAACTACCATGGCACAAGACTCTTCATTTTTTCTAAACAAAATTTGTTCCCTTGACATCACCACAGCCAACAGCAACTTCCATGTCAATCTCATGACACTTCTCTCTTCATTGCCAACAAAAGCCATAGAAAACACTGAATTCTACAACCCTATTATTGGTATAAATCCCTCAGATTCTATCTATGGATTGTTCATGTGTAGGGGTGATGTAGACTCTCAACTTTGTCATGAATGCATAGGCAATGCAACTCAATATCTATCCTCAGAGTGTTCTTTGTCCATACACGCTTCGATTTGGTACAACGAGTGCACGGTTCAATACTCTAACAATTCTTTCTTTCCTGTAGTTGATACGAACTCCAGTTTTTTCATGTGCAATACCGCGAATTTCTCAAACACGAAAAGCCTTGTGCCTTTAATGTTTTCAACGATGAATCTAACGGCAGATGAAGCAGCTAGTGAGAAGAAGAAGTTTGCAACAAATGAACGAGTTTTCGAAGATCAAACCCTTTATTGTCTAGCTCAGTGCACTTCACACTTATCGCCGAATGATTGTAGAACCTGTCTGGGTAGTGCTATCCAAGAACTTCGAATTTATTGTGATGGAAAACTAGGTGGGAGATTTCTTTACCCTAGTTGTAATGTTAGGTATGAACTATATCCTTTTTATAGGTCTACTAATGTTCTTTCACCAAATGAGCTTGCTCCTCAAACAAATGATTCGATTTCGAAACAAGAATCAAGATTTCCGGAAGATCCATTATATCTTTCCCAAAATTGCTCAAATAAACACAATACAATCACTTCGAAAAATTTCAACTTACTTCTCTCTTATTTGTTGTCCAACGCCACCACCGGAAAACTATTTGATACAGTTATAATGGACGGAATTGTGTACGGCCTCTTCATGTGTCGGAGGGACCTCTCTTCACACCTTTGTGCTCAATGCATAAAAAACGCAAAAGATCGAATATACTCCATGTGTCTTTCATCCTCAGAGGAAATATTGAATAGCCAAGAATGCATTTCTTGTCTAAATGATATGATAAGTACACAAATTCCGTGGTCATTTTTGGGAAGTGTTGGGGGAAGAATTATGTATCCTAACTGCAATCTGAGATTTGAATTGTTCCAATTTTACTTGAAGAGCGACGATCAGGCGCCTCGAAATCCTTCAAAAGAAGCAGAAAAGCGGAAAGTTATCTCAATTGTGGTCCCTACAATTATTTTGGCGATGCTCCTTTCTATTGGATATTATTTGCTAAAGGGAAGGGGAAGAAAGAATCGTAGGACTATTCTTCGAGATAATTTTGGTAAGGAAAGTGTCATTTTAGAACCACTTCAATTCGATTGGGCAGTAATTGAAGCAGCAACCAACAACTTTTCTAAAGACAATTATATTGGCGAAGGCGGGTTTGGAGAAGTTTACAAGGGTATCCTTTTGAATGGACAAGAAGTTGCTATGAAGAGGCTTTCAAGAGGTTCTAAACAAGGTGTAGAGGAGTTCAAAAATGAAGTTTTATTGATAGCAAAGCTTCAACATAGAAATCTAGTGACATTTATTGGTTTTTGCCTTGAAGGACATGAGAATATACTTATTTATGAATTTGTGCCCAATAAGAGTCTTGATTACTTTTTATTTGATTGTCATCACCAAAAGTTGTTAACTTGGGTTGAACGCTTTAACATCATAGGAGGAATTGTTCGAGGAATTCTTTATTTGCATGAACATTCTCGACTCAAAGTTATACATCGCGATCTTAAACCTAGTAATATTCTTTTAGATGAAAATATGATTCCTAAAATTTCCGATTTTGGTCTGGCTCGAATTATGGAAATAAGTCAAGACGAAGGAAGTACAAACAGAATTGTTGGAACATATGGTTATATGGCTCCGGAATATGCTATGCTTGGACAATTTTCAGAAAAGTCGGACGTTTATAGTTTTGGAGTCATGCTGTTGGAGATTGTAGCAGGAAAAAAGAATATAAGCTCATATGCGCAACGCCATGTTGCTGATAACCTTTTGAATTATGTTTGGAGACAATGGAATGATCAAACACCTTTGAGTATATTGGACCCAAAAATTAAAGAAGATTATTCAGAAAAAGAATTCATAATATGCATTCAGATTGGTCTATTATGTGTTCAACGTGATCCAGATGCTAGACCTTCAATGGTGACAATTGCTTCTTATCTTAGTAGTTATTCAATTGAATTACCAACACCACAAGAACCTGCATTTTTCTTGCATGATAGAACTTTTTCAAATGTTGCTGCACAAGGATCAAGTTCTACTCAATTTGTTAATAGTTCTTCATTGTTGTCTATCAATCAAATGTCTACTACAAATACTTTTAGTCCTCGATAG 2427 0.3642 MAYSKIIFLSILVRFLTFATTMAQDSSFFLNKICSLDITTANSNFHVNLMTLLSSLPTKAIENTEFYNPIIGINPSDSIYGLFMCRGDVDSQLCHECIGNATQYLSSECSLSIHASIWYNECTVQYSNNSFFPVVDTNSSFFMCNTANFSNTKSLVPLMFSTMNLTADEAASEKKKFATNERVFEDQTLYCLAQCTSHLSPNDCRTCLGSAIQELRIYCDGKLGGRFLYPSCNVRYELYPFYRSTNVLSPNELAPQTNDSISKQESRFPEDPLYLSQNCSNKHNTITSKNFNLLLSYLLSNATTGKLFDTVIMDGIVYGLFMCRRDLSSHLCAQCIKNAKDRIYSMCLSSSEEILNSQECISCLNDMISTQIPWSFLGSVGGRIMYPNCNLRFELFQFYLKSDDQAPRNPSKEAEKRKVISIVVPTIILAMLLSIGYYLLKGRGRKNRRTILRDNFGKESVILEPLQFDWAVIEAATNNFSKDNYIGEGGFGEVYKGILLNGQEVAMKRLSRGSKQGVEEFKNEVLLIAKLQHRNLVTFIGFCLEGHENILIYEFVPNKSLDYFLFDCHHQKLLTWVERFNIIGGIVRGILYLHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIMEISQDEGSTNRIVGTYGYMAPEYAMLGQFSEKSDVYSFGVMLLEIVAGKKNISSYAQRHVADNLLNYVWRQWNDQTPLSILDPKIKEDYSEKEFIICIQIGLLCVQRDPDARPSMVTIASYLSSYSIELPTPQEPAFFLHDRTFSNVAAQGSSSTQFVNSSSLLSINQMSTTNTFSPR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01475 808 ProSiteProfiles Gnk2-homologous domain profile. 269 369 IPR002902 -
Trre11g01475 808 SUPERFAMILY Protein kinase-like (PK-like) 463 788 IPR011009 -
Trre11g01475 808 ProSiteProfiles Gnk2-homologous domain profile. 137 241 IPR002902 -
Trre11g01475 808 Gene3D - 26 131 IPR038408 -
Trre11g01475 808 Gene3D - 136 241 IPR038408 -
Trre11g01475 808 Gene3D - 273 355 IPR038408 -
Trre11g01475 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 601 613 IPR008271 GO:0004672|GO:0006468
Trre11g01475 808 SMART serkin_6 480 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g01475 808 Pfam Salt stress response/antifungal 159 239 IPR002902 -
Trre11g01475 808 Pfam Salt stress response/antifungal 39 128 IPR002902 -
Trre11g01475 808 Pfam Salt stress response/antifungal 279 394 IPR002902 -
Trre11g01475 808 FunFam Cysteine-rich receptor-like protein kinase 25 139 241 - -
Trre11g01475 808 ProSitePatterns Protein kinases ATP-binding region signature. 486 508 IPR017441 GO:0005524
Trre11g01475 808 Gene3D Phosphorylase Kinase; domain 1 445 555 - -
Trre11g01475 808 ProSiteProfiles Gnk2-homologous domain profile. 27 131 IPR002902 -
Trre11g01475 808 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 441 555 - -
Trre11g01475 808 ProSiteProfiles Protein kinase domain profile. 480 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre11g01475 808 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 802 - -
Trre11g01475 808 CDD STKc_IRAK 486 752 - -
Trre11g01475 808 Gene3D Transferase(Phosphotransferase) domain 1 556 761 - -
Trre11g01475 808 FunFam cysteine-rich receptor-like protein kinase 10 556 759 - -
Trre11g01475 808 Pfam Protein kinase domain 481 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01475 Trre-Chr11 14362506 14366693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01475 189 808 Receptor kinase-like Gene Family AT4G05200 40.250 8.17e-141 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre11g01475 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01475 - - cam:101493835 682.945