Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01454 ATGTCTCTATTTACTCAAAAAATTCTCTTGATGTTTGTTTTGTCTTTGCTATCGGCGCACAATGTGGTGGCTAGTTATTTCAAGACCGCCGTGACTATTACTAACACTTTGTCAGGAAATTTAGACTTAAATATTCATTGCAAATCTGGAGATGATGATCTTGGACCTCATCTTCTTCATCAAGGTCAGAGTTTTAGTTGGAGTTTTGGAAATAATTTTTTTGGAGGAACATTATACTTCTGTTCCTTTCAATGGAATAATGAGATACATAGTTTTGATGTATATGATGAAGATAAAGATCTTTTAAAATGTTATAAGAGTAATTGCATTTGGCTTATAAAACAATCTGGACCTTGTAAGGTACACCCTGATGAAAAGCATGATGAATGCATTTCGTGGCCTAATTGA 408 0.3358 MSLFTQKILLMFVLSLLSAHNVVASYFKTAVTITNTLSGNLDLNIHCKSGDDDLGPHLLHQGQSFSWSFGNNFFGGTLYFCSFQWNNEIHSFDVYDEDKDLLKCYKSNCIWLIKQSGPCKVHPDEKHDECISWPN 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01454 135 Pfam Plant self-incompatibility protein S1 31 133 IPR010264 -
Trre11g01454 135 PANTHER - 28 122 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01454 Trre-Chr11 14242387 14242794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01454 28 133 Carbohydrate Esterase AT3G16970 39.450 2.85e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01454 - - tpra:123904838 252.677