Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01443 ATGGCACAACAAAAGGAATTCAATCTCAAGAAACCTTCTGCATATCACTATGACATATTGTTGCTAGGATTCATGACTTTGCTTTGTGGACTAATTGGCCTGCCTCCTTCTAATGGAGTTTTGCCTCAATCCTCTATGCACACCAAGAGTCTAGCTGTTCTCAAGAAGCAGTTGATCCAACGAAAGATAGTTAAAACTGCCAAGGAAAGCATAAGGCTGAAAGCTAGGAATTGTGAAATATATGGAAAGATGCATGAAGTATTCATAGAAATGGATATTAATCCTAATAATCATTCAGTGTTCAAAGAACTAGAGAATTTGAAAGATATTGTTCTAAATGGTGAAGATATGGGAGACAACAATAAGAACACATTTGATCCGGAGAAACACATTGATACATATTTGCCTGTAAGAGTAAACAGGCTTATTGCTCTCTCGTTTTCCGAAGTATAA 453 0.3642 MAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSSMHTKSLAVLKKQLIQRKIVKTAKESIRLKARNCEIYGKMHEVFIEMDINPNNHSVFKELENLKDIVLNGEDMGDNNKNTFDPEKHIDTYLPVRVNRLIALSFSEV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01443 150 Pfam HCO3- transporter family 2 58 IPR011531 GO:0006820|GO:0016020
Trre11g01443 150 PANTHER ANION EXCHANGE PROTEIN 1 69 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01443 Trre-Chr11 14147820 14148837 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01443 1 140 Antiporters AT1G15460 67.586 2.52e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01443 K24194 - gmx:100811184 224.557