Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01441 ATGCCAGATTCAACTTGTTTCACCATAGGTGCAAACAACTCTAGGCGATTGGACTTTGTTGGTCATGAAGTTGTTCCACCAATGAAGCTTTCTGATATCATTCCAAATGCTAGCACAGAAGCTATAGATTTGATCACACAATTGTTGTCGTGGGACCCATCAAGAAGGCCAGACGCGGATCAGTCACTGCAACATCCTTTTATCCCTGTGAATACAAGGGTTCCTCGTTCACTCAGTGATCCATTTGAGCAGAAGCTGAGTAACAAAAGGGCAAAGCCAAATCTTGAGCTGAAACTGCATGATTTTGGCCCTGATCCCGATGATTGTTTTCTTGGGTTGACATTGGCTGTAAAGCCCAGTGTTTCAAACTTGGATGTGGTTCAAAATGCATCTCGGGGTATGGGAGAGAATATGCTATTTTGCTCGGATTTTAATGATCATTCAGACCAATCAGGTTCCTTTTCAAGATCAACTGTTAATCATGAAAGTGGTGCGAAATCTGGAGTATCAGCGATAGTTTCAGGGATCATAATAACTTGTGCACTTTTGTTTTTGACGCCATTATTTGAGAGCATACCTCAGGGAAAGTATAAACATAGACGAGAAGAATTAACCCAACCAGCATCTTTGGAAGGAACTTCGGCACCAAATGAACTAGATGTGTGGATTGAGGTTGCAGGAATAAGGAAAGGACATATATATGGTCTTTGGAGTGAATCTTCTTTGTTTGCAAGCTGGCGAAATTATCGTGGTTCAAGTTCCTCTTCAATTGAATGGGTGCAAAGACATGAATTTGAAGAACTGAAACTTGAAAGGGATGAACTTCGTGATATGGTAAAACAATCAATGGAAAGCCATATACTAGAGATCAAGTTCATGAAGATGATGTGGTTGATGATAATGAGGATGTGA 912 0.4068 MPDSTCFTIGANNSRRLDFVGHEVVPPMKLSDIIPNASTEAIDLITQLLSWDPSRRPDADQSLQHPFIPVNTRVPRSLSDPFEQKLSNKRAKPNLELKLHDFGPDPDDCFLGLTLAVKPSVSNLDVVQNASRGMGENMLFCSDFNDHSDQSGSFSRSTVNHESGAKSGVSAIVSGIIITCALLFLTPLFESIPQGKYKHRREELTQPASLEGTSAPNELDVWIEVAGIRKGHIYGLWSESSLFASWRNYRGSSSSSIEWVQRHEFEELKLERDELRDMVKQSMESHILEIKFMKMMWLMIMRM 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01441 303 Coils Coil 265 285 - -
Trre11g01441 303 Gene3D Transferase(Phosphotransferase) domain 1 8 103 - -
Trre11g01441 303 Pfam Sulfate permease family 150 194 IPR011547 GO:0016020
Trre11g01441 303 Coils Coil 302 303 - -
Trre11g01441 303 PANTHER SULFATE TRANSPORTER 151 194 IPR001902 GO:0016020|GO:0055085
Trre11g01441 303 SUPERFAMILY Protein kinase-like (PK-like) 23 69 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01441 Trre-Chr11 14133911 14138932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01441 133 194 Inorganic Solute Cotransporters AT3G12520 56.452 5.66e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01441 K08829 K08830 gmx:100804781 249.595