Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01427 ATGGTTGATGATCTTGGTGTTTTTGTTGTCTCTGTTGAGTACCGTCTTGCACCGGAGCACCGATTGCCGGCGGCGTATGATGATGCTATGGAAGCACTATTTTGGATAAAAAGTATTGGTGATGAGTGGGTGAGACGTTATGTTGACTATTCTAAATGTTATCTCATGGGGAATAGTGCTGGTGCTACCATAGCCTACCATGCAGGTCTAAGGGCAGTAGAAGTTGTGAAGGATCTTGAGCCACTGAAGATCCAAGGGTTAATATTGCGCCAACCATTCTTTGGTGGGAAAGAGAGAACCAAATCCGAATTAGAGCTTGAGAATGATTCAATCATTCCATTGTGTGTTAATGATTTAGCGTGGGAGTTAGCACTTCCACTTGGTGTTGACCGTGATCATGAGTATTGCAATCTAACGGTTGGGAATGGTCTTGAAAAGTTTGATAAAATAAGGGCCCTTGGATGGAAGGTGTTGGTTAGTGGGAATGGTGGTGATCCAATAGTGGATCATGAGAAAGAGTTGGCACAATTGATGGAGGAAAAAGGTGTTCATGTTGTGAAGGATTTTGAGGATGATGGTTCTCATGCAATAGAGTATTTTGATCCATTGAAAGCTAAGAAATTGATTGAGTTAATTAAGGATTTTATTTCATAA 654 0.4113 MVDDLGVFVVSVEYRLAPEHRLPAAYDDAMEALFWIKSIGDEWVRRYVDYSKCYLMGNSAGATIAYHAGLRAVEVVKDLEPLKIQGLILRQPFFGGKERTKSELELENDSIIPLCVNDLAWELALPLGVDRDHEYCNLTVGNGLEKFDKIRALGWKVLVSGNGGDPIVDHEKELAQLMEEKGVHVVKDFEDDGSHAIEYFDPLKAKKLIELIKDFIS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01427 217 Gene3D alpha/beta hydrolase 1 217 IPR029058 -
Trre11g01427 217 PANTHER ARYLACETAMIDE DEACETYLASE 3 196 - -
Trre11g01427 217 SUPERFAMILY alpha/beta-Hydrolases 4 216 IPR029058 -
Trre11g01427 217 Pfam alpha/beta hydrolase fold 2 196 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01427 Trre-Chr11 14009567 14012599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01427 9 137 Carbohydrate Esterase AT5G16080 44.203 7.31e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01427 - - aprc:113866682 330.487