Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01426 ATGTCTCAAACATCTCAAATAATTGATCCCTACAAACACCTTCATCTCATCAAAAACCCAAACAACACAATCACACGTTTACTTGAACTTCCATACACCTCACCTTCATCCGATCCAACACTACCAATCTCAGTTCTCACAAAAGACATCACAATAAACCAAACAAACAAAACATGGGTTCGATTATTCCTACCAAACAAAACAATACCCACTAATCAAAAACTACCTCTTATTGTTTTCTTTCATGGAAGTGGGTTTATATTAGCTAGTGCTGGTTCAACTATGTTTCATGATTTTTGTGTGAAAATGGTTGATGATCTTGGTGTTTTTGTTGTCTCTGTTGAGTACCGTCTTGCACCGGAGCACCGATTGCCGGCGGCGTATGATGATGCTATGGAAGCACTATTTTGGATAAAAAGTATTGGTGATGAGTGGGTGAGACGTTATGTTGACTATTCTAAATGTTATCTCATGGGGAATAGTGCTGGTGCTACCATAGCCTACCATGCAGGTCTAAGGGCAGTAGAAGTTGTGAAGGATCTTGAGCCACTGAAGATCCAAGGGTTAATATTGCGCCAACCATTCTTTGGTGGGAAAGAGAGAACCAAATCCGAATTAGAGCTTGAGAATGATTCAATCATTCCATTGTGTGTTAATGATTTAGCGTGGGAGTTAGCACTTCCACTTGGTGTTGACCGTGATCATGAGTATTGCAATCTAACGGTTGGGAATGGTCTTGAAAAGTTTGATAAAATAAGGGCCCTTGGATGGAAGGTGTTGGTTAGTGGGAATGGTGGTGATCCAATAGTGGATCATGAGAAAGAGTTGGCACAATTGATGGAGGAAAAAGGTGTTCATGTTGTGAAGGATTTTGAGGATGATGGTTCTCATGCAATAGAGTATTTTGATCCATTGAAAGCTAAGAAATTGATTGAGTTAATTAAGGATTTTATTTCATAA 960 0.3927 MSQTSQIIDPYKHLHLIKNPNNTITRLLELPYTSPSSDPTLPISVLTKDITINQTNKTWVRLFLPNKTIPTNQKLPLIVFFHGSGFILASAGSTMFHDFCVKMVDDLGVFVVSVEYRLAPEHRLPAAYDDAMEALFWIKSIGDEWVRRYVDYSKCYLMGNSAGATIAYHAGLRAVEVVKDLEPLKIQGLILRQPFFGGKERTKSELELENDSIIPLCVNDLAWELALPLGVDRDHEYCNLTVGNGLEKFDKIRALGWKVLVSGNGGDPIVDHEKELAQLMEEKGVHVVKDFEDDGSHAIEYFDPLKAKKLIELIKDFIS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01426 319 Pfam alpha/beta hydrolase fold 78 298 IPR013094 GO:0016787
Trre11g01426 319 SUPERFAMILY alpha/beta-Hydrolases 21 318 IPR029058 -
Trre11g01426 319 Gene3D alpha/beta hydrolase 11 319 IPR029058 -
Trre11g01426 319 PANTHER ARYLACETAMIDE DEACETYLASE 33 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01426 Trre-Chr11 14009567 14012905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01426 35 238 Carbohydrate Esterase AT1G68620 40.476 1.74e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01426 - - aprc:113866682 449.514