Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01411 ATGGTGTTATTTGGGATATTAACTTTGTTAGCAATATTTGCTCTCTTTGTATTTTTGAAACTAATATATTCTTGGTGGATTTCACCAATTCAAAGAAATCATAAGCTTCAAAGATGTGGATTTCAAGGGCCACCCCCAAATTTTCCATTCGGAAATGTCCAAGAGATGAAAAAGAAAAATGGTGTTGATTTTTCATTTGGGTCCTCAAAGCTCACCCATGATATACATTCATTTGTTTTCCCCTATTTTTCTAGGTGGCAAAAGTCTCATGGAAAAGTTTTCATCTATTGGCTAGGGACAGAACCATTTCTATACATTGCAGACCCAGAATTCTTGAAAAAAATGTCCACAGAAGTTAAAGAAAAGATATGGGGAAAACCAAATGTATTTAGAAATGATAGAGAGCCTATGTTTGGAAAGGGTTTGTTGATGGCTGAAGGCAATGAATGGGTTCATCAAAGGCATGTAATAGCCCCAACATTTACTCCTCTTAACTTGAAGGAAATGTCAAGCATGATAGTAGACTCTACAAAGAAAATGATGGATAGATGGATTACTCGAATCAACTCTGGAAATCTCGAAATTGATATCGAAAGAGAGATTTTTTTAACCTCAGGAGAGATCATAGCAAGACCAAGCTTGGGTATAAATGATGAAAATGCAAGAAAAACTTGTGAAAAATTACGTACCCTACAAATGGTACTTTTCAAGACAACAAGATATGTAGGTGTTCCATATATCAAGTTTATTGACATAAAGGGAACCATAGAAGCAAAGAAACTTGGGAAGGAAATAGATAAGATTTTTTTTTGTGTCATAGAAAGTCGAAAGGAATCAAAAGTGATAAGAAAAGGTAGAGAAGATTTGTTGGATTTGTTGTTGCATGAAAATCAAATTGATGGAAAGTATGGGAAAATATTGAGCACAAAACAATTGGTGGATGAATGCAAGACATTCTTCTTTGCTGGCATTGAGACATCAGCATTGGCTATTTCTTGGGCTTTGATGCTTTTAGCTATGCATGAAGATTGGCAAAATCAATTGAGAGAGGAGATAAGAGAAGTGGTTGGTGATAAAGAAGTTGATATCAATGTGCTTGCTGGTTTGACAAAGATGAAGTGGGTAATGAATGAAGTTCTAAGGCTCTATCCATCAGCACCAAATGCTCAAAGGCAAGCTAGAGAAGACATTAAATTTGAAAATTTAACCATTCCTAAGGGGACCAACTTGTGGATCGACATTGTCGCAATGCACCACGACCCATTATTGTGGGGAGAAAATGTGAATGAATTTCTACCAGAAAGGTTCATGGGCGACGTAAATGGTGGATGCAAGCAAAAGTTGGGATATTTACCTTTTGGGTTTGGAGGAAGAATTTGTGTTGGTAAAAACTTGAGTTTAATGGAGCATAAAATAGTGTTAACTCTTCTTCTCTCTAGATTTAGATTTAAAATCTCTCCAACTTATATTCATTCACCTTCTATTATGCTCACACTAAGGCCAGGTTATGGCCTCCCTCTAATAGTTCAGTCCATTTAG 1539 0.36 MVLFGILTLLAIFALFVFLKLIYSWWISPIQRNHKLQRCGFQGPPPNFPFGNVQEMKKKNGVDFSFGSSKLTHDIHSFVFPYFSRWQKSHGKVFIYWLGTEPFLYIADPEFLKKMSTEVKEKIWGKPNVFRNDREPMFGKGLLMAEGNEWVHQRHVIAPTFTPLNLKEMSSMIVDSTKKMMDRWITRINSGNLEIDIEREIFLTSGEIIARPSLGINDENARKTCEKLRTLQMVLFKTTRYVGVPYIKFIDIKGTIEAKKLGKEIDKIFFCVIESRKESKVIRKGREDLLDLLLHENQIDGKYGKILSTKQLVDECKTFFFAGIETSALAISWALMLLAMHEDWQNQLREEIREVVGDKEVDINVLAGLTKMKWVMNEVLRLYPSAPNAQRQAREDIKFENLTIPKGTNLWIDIVAMHHDPLLWGENVNEFLPERFMGDVNGGCKQKLGYLPFGFGGRICVGKNLSLMEHKIVLTLLLSRFRFKISPTYIHSPSIMLTLRPGYGLPLIVQSI 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01411 512 SUPERFAMILY Cytochrome P450 73 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01411 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Trre11g01411 512 Gene3D Cytochrome P450 25 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01411 512 Pfam Cytochrome P450 76 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01411 512 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01411 512 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01411 512 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01411 512 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01411 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 503 - -
Trre11g01411 512 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01411 512 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01411 512 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01411 512 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01411 512 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01411 512 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01411 Trre-Chr11 13761615 13767097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01411 2 512 Cytochrome P450 AT5G52400 55.212 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01411 - - gmx:100810679 744.191