Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01407 ATGGTGTTATTTGGGATATTAACATTGTTGGCAATATTAGCTCTCTTTTTATTTTTGAAACTAATATTTTCTTGGTGGATTTCACCAATTCAAAGAAATCATAAGCTTCAAAGATGTGGATTTCAAGGGCCACCCCCAAATTTTCCAGTTGGAAATGTCCAAGAGATGAAAAAGAAGAATGGTGTTGATTCTTCATTTGAGTCCTCAAAGCTCACCCATGATATACATTCATTTGTTTTCCCCTATTTTTCTAGGTGGCAAAATTCTCATGGTAAAGTTTTCATTTATTGGCTAGGGACAGAACCTTTTCTATACATTGCAGACCCTGAATTCTTGAGGAAAATGTCCACAGAAGTTATAGCAAAGAGATGGGGAAAACCAAATGTATTTAGAAATGATAGAGAGCCTATGTTTGGAAAGGGTTTGGTGATGGCTGAAGGCAATGAATGGATTCATCATAGGCATGTTATTGCCCCAACATTTGCTCCTCTTAAATTGAAGGCAATGTCAAGCATGATGGTAGAATCTACAAAGAAAATGATGGATAGATGGATTACTCGAATCAATTCGGGAAACCTCGAAATTGATATTGAAAGAGAGATCGTTGCAACCGCGGGAGAGATCATAGCAAGAACAAGCTTTGGTATAAATGATGACAATGCAAGAAAAATTTGTGAAAAATTACGTACCCTACAAATGACACTTTTCAAGACAACAAGATATGTAGGTGTTCCATATATAAAGTTCATTGACATAAAAAAAACCATAGAAGCAAAGAAATTTGGGAAGGAAATAGATAAGCTTTTGCTTAGTGTGATAGAAAGTCGAAAGGAATCAAAAGTGAAAAGAAATGGTAGAGAAGATTTGTTGGATTTGTTGTTGCATGAAAATCAAGTTGATGGAAAGTATGGGAAAAGATTGAGCACAAAACAATTGATGGATGAATGCAAGACATTCTTCTTTGCTGGTCATGAGACAACAGCATTGGCTATTTCTTGGACTTTAATGCTTTTAGCTATGCATGAAGATTGGCAAAATCAATTGAGAGATGAGATAAGACAAGTGGTTGGTGATAAAGAAGTTGATACCAATGTGCTTAGTGGTTTGACAAAGATGAAATGGGTAATGAATGAAGCTCTAAGGCTCTATCCATCAGCACCAAATGTTCAAAGACAAGCTAGAGAAGACATTAAATTTGATAATATAACAATTCCTAATGGGACCAACATGTGGATTGACGTTGTCGCGATGCACCACGACCCATTGTTGTGGGGAGAAAATGCGAATGAGTTTCGACCAGAAAGGTTCATGGGCGACGTAAATGGCGGATGCAACCAAAAATTGGGATACTTACCTTTTGGATTTGGAGGAAGAATGTGTGTTGGTAGAAACTTGAGCTTCATGGAGTATAAGATAGTGTTAACCCTTCTTCTTTCTAGATTTAGTTTTAAAATTTCCCCAAATTATATCCATTCACCTTCTATTATGCTTTCACTAAGGCCAGCTTATGGACTCCCTCTAATAGTCCAATCGCTTTAG 1539 0.3658 MVLFGILTLLAILALFLFLKLIFSWWISPIQRNHKLQRCGFQGPPPNFPVGNVQEMKKKNGVDSSFESSKLTHDIHSFVFPYFSRWQNSHGKVFIYWLGTEPFLYIADPEFLRKMSTEVIAKRWGKPNVFRNDREPMFGKGLVMAEGNEWIHHRHVIAPTFAPLKLKAMSSMMVESTKKMMDRWITRINSGNLEIDIEREIVATAGEIIARTSFGINDDNARKICEKLRTLQMTLFKTTRYVGVPYIKFIDIKKTIEAKKFGKEIDKLLLSVIESRKESKVKRNGREDLLDLLLHENQVDGKYGKRLSTKQLMDECKTFFFAGHETTALAISWTLMLLAMHEDWQNQLRDEIRQVVGDKEVDTNVLSGLTKMKWVMNEALRLYPSAPNVQRQAREDIKFDNITIPNGTNMWIDVVAMHHDPLLWGENANEFRPERFMGDVNGGCNQKLGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFSFKISPNYIHSPSIMLSLRPAYGLPLIVQSL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01407 512 Gene3D Cytochrome P450 26 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01407 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Trre11g01407 512 SUPERFAMILY Cytochrome P450 76 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01407 512 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01407 512 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01407 512 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01407 512 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01407 512 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01407 512 Pfam Cytochrome P450 80 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01407 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 503 - -
Trre11g01407 512 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01407 512 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01407 512 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01407 512 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01407 Trre-Chr11 13750079 13754070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01407 2 512 Cytochrome P450 AT5G52400 56.977 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01407 - - gmx:100810679 807.749