Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01402 ATGTCAACACAACCTTCCTTTAGTAGGCATATCATTGTTCCTCAAAATTCAAGGGAGAAATTTGCCACATCCTCCTCTAAAAGGCCTAGGGGTAGACCCCTGGGATCTAATAACAACCCCAAATCCCATGTTGTAATTGAGGAATTTACGGAGATCCCATTGAAAACAGTTCTCATTGAGATCCCTATGGGAAAATATATTTTTCATCACCTTTTAAGAGTTTTGCGACTCTACTGTTGGACCCTAAGCCGCACTAAACCACCGTTCTCTCAGCGGCAGTCGCGGTCGGAGATTCGCGGTTTCAACACTTTAGCATCTTCATGTGTTTTTGCCATTGCCATTGCTATCTACTAA 354 0.4294 MSTQPSFSRHIIVPQNSREKFATSSSKRPRGRPLGSNNNPKSHVVIEEFTEIPLKTVLIEIPMGKYIFHHLLRVLRLYCWTLSRTKPPFSQRQSRSEIRGFNTLASSCVFAIAIAIY 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01402 117 MobiDBLite consensus disorder prediction 16 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01402 Trre-Chr11 13693757 13697053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01402 27 76 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 38.000 1.24e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01402 - - tpra:123922662 74.7146