Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01390 ATGTCAAAAGATGAATCAAAAGAAGCTTTACAATTAGATTCAAATCCCACAGTTGATTCTTCAGAGAGCCAACCTATTATCATAAATCATGATGGTAGTGTCACAAGGATCATGAAAATTCCAAACACTGAACCCACACAAGACCCAAACAACATTGTTCTCACCAAAGATGTCCCTCTTAACCTTATTAACAAAACTTTCATACGTTTGTTCCTACCTCGTATAGCACTTCACAATTCTAGAAAACTCCCTCTAATTGTTTACTATCATGGAGGTGGTTTTATATTCTTTAGTGCTTCGTCCACGGTCAACCATGAGTTTTGCGTTAAATTAGCAGAAAAAATTGGTGTTGTGGTTGCATCCGTGGATTACCGTCTTGCGCCAGAACACCGTCTCCCCGCCGCCTATGACGACGCGGTTGAGGCATTACATTGGTTGAGAACAACAAATGAGAAATGGGTGCGTCAATTTTGTGATGTGTTCAATTTTTACCTTATGGGATCTAGTGCGGGAGGGAACATTGCGTACCACGCAAGTTTACATGTGGCCAAAACCGTTGATGAAGTTGATTTTGACAAATTTAAGATCAGAGGGTTGATATTGCACCATCCGTTTTTTGGTGGGTCCACGAGGACAAATACCGAGTTGAGACTCGAAAACGATCGAGCTTTGCCTCTTAAGGCGAGTGATCTAATGTGGGAGTTTACATTGCCTGAGGGTGTAGGTAGGGACCATAAGTTTTGCAATCCAATGGTTGTGGATGAAGAAGATGACGCATGTTTTGATAGAATCAAACGGTTGGGATGGAAGATTCTCTTGACGGGTTGTGATGGAGACCCCTTGATTGATCGTCAGGTTGAATTTGTGGAGATGTTGAGAAGCAAAGGGATTGAAATTATGAGTTACTTTAGGGAAGGTTTTCATGGGATGGAATTATTGGAACCTAGGGGAGATGAACCACTATTTGAACAAATAAAAGATTTGATAAATAATTGTATCACATTTGATAAACTCTAA 1017 0.4041 MSKDESKEALQLDSNPTVDSSESQPIIINHDGSVTRIMKIPNTEPTQDPNNIVLTKDVPLNLINKTFIRLFLPRIALHNSRKLPLIVYYHGGGFIFFSASSTVNHEFCVKLAEKIGVVVASVDYRLAPEHRLPAAYDDAVEALHWLRTTNEKWVRQFCDVFNFYLMGSSAGGNIAYHASLHVAKTVDEVDFDKFKIRGLILHHPFFGGSTRTNTELRLENDRALPLKASDLMWEFTLPEGVGRDHKFCNPMVVDEEDDACFDRIKRLGWKILLTGCDGDPLIDRQVEFVEMLRSKGIEIMSYFREGFHGMELLEPRGDEPLFEQIKDLINNCITFDKL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01390 338 SUPERFAMILY alpha/beta-Hydrolases 23 329 IPR029058 -
Trre11g01390 338 MobiDBLite consensus disorder prediction 11 25 - -
Trre11g01390 338 Gene3D alpha/beta hydrolase 22 335 IPR029058 -
Trre11g01390 338 MobiDBLite consensus disorder prediction 1 25 - -
Trre11g01390 338 PANTHER ARYLACETAMIDE DEACETYLASE 36 310 - -
Trre11g01390 338 Pfam alpha/beta hydrolase fold 86 309 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01390 Trre-Chr11 13624690 13625706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01390 15 314 Carbohydrate Esterase AT5G16080 35.350 1.35e-53 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01390 - - psat:127130592 510.375