Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01348 ATGAATTTTTATGCAACTGGAGCTGGTAGATTGAAACTGAAGCTACAAGAGAGAGTGTGCTTCAACGCTGCTGCACTCATTGAAACATTCCTAGATGCGGATCGGTGGGCGGAGATGTTTCCGTGTATGATTGTTGAAGCTGAAACTTTGGATGTATTTTCTAATGAAATTGACGCAACCAAAAATGGACCTATACAACTAATTGAAGTTGGTACTGATTGGGAATTTGATTATACTTTTGTGATGCATGTTGAGATTCAATTGCCTTCTCCATTGATACCAGATCGAGAATATAATTTCATCAGGATTTGCAAGCAGTATGCTGAAGGTAAGTGGGTTATGGATGATGTTTCGTTCGAGTATGGTTGTAATGGTGCCAACGGGAACCCTAACATGAGCTGCGAAAACCATTAG 414 0.401 MNFYATGAGRLKLKLQERVCFNAAALIETFLDADRWAEMFPCMIVEAETLDVFSNEIDATKNGPIQLIEVGTDWEFDYTFVMHVEIQLPSPLIPDREYNFIRICKQYAEGKWVMDDVSFEYGCNGANGNPNMSCENH 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01348 137 ProSiteProfiles START domain profile. 22 121 IPR002913 GO:0008289
Trre11g01348 137 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 121 IPR042160 -
Trre11g01348 137 Pfam START domain 21 119 IPR002913 GO:0008289
Trre11g01348 137 SUPERFAMILY Bet v1-like 21 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01348 Trre-Chr11 13193486 13196586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01348 19 130 Homeobox Transcription Factor Family AT4G00730 41.964 8.43e-25 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01348 K09338 - tpra:123905936 130.183