Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01344 ATGTCAAAGCTTGCTCAGCGGATGATCGATTACTTCTGCATTGCGCTAAGTGCTGCAACATCTGTTTGGATGCCGGTGTCGCGACAAAGGGTGTTTGACTTCCTCCACGATGCACGCTTGAGATTTGAATGTGATCTTTTGTCCAGTGGTGGAACAATGCACGAAATGGTCCACATTGCTACAGGAGGACTTGGAAATTCCGTTTTTATCATTAGCGCTGATAATTCCTTGAACTTGGTGATGTCTGGAGGAGATTCTTCATTTGTTGCTCTTTTGCCTTCCGGCTTTTCAATTCTTCCGGATGGCTATTCGAGTAACAACAGCAATGGAACTTCAAGTGATGGTAGCAGCAGTAGCGGCAGCGACAATGTCGGATGCTTACTCACGTTTGGATTGAAAATGTTGCTGAACAACCATCCATCAAGTAAGCTGACAATTGAATCGATTGATACTGTCAATAACCACATTGCGACCACCATCCAGAAGGTCAAAGACGTTATCGGAGTTGCTTGA 513 0.4483 MSKLAQRMIDYFCIALSAATSVWMPVSRQRVFDFLHDARLRFECDLLSSGGTMHEMVHIATGGLGNSVFIISADNSLNLVMSGGDSSFVALLPSGFSILPDGYSSNNSNGTSSDGSSSSGSDNVGCLLTFGLKMLLNNHPSSKLTIESIDTVNNHIATTIQKVKDVIGVA 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01344 170 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 14 166 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01344 Trre-Chr11 13160862 13161687 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01344 14 164 Homeobox Transcription Factor Family AT3G61150 42.162 1.16e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01344 K09338 - gmx:100820113 145.976