Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01281 ATGTTTCATACTAACAACTCTTCATCTTCCTCAGATATGTCATTATCGAATTCCGAGGGCTCTCATTGGATGTCAGTGCCTAACGACGAGATGCAGTTAGCAGCGAACTCTGTGTGGCGGCTCCCTAAACCTGCTACTAATGAGGCAAAAGATATACAAAAGGCGGCTACTGAAGCCGCCGAGCTATTTAGACCAGAGAAGACTTTAATGACTAATGACAATAACATGGTGGTAATTGCCGCGGCCGCCACGGAGGAGCAAAGTAGGCTTTGTCCTGAAGAGGAAGAAGTGGAAGCAATGGACATGCAAGAGATGTGGAGGAATATGGCACTCATGTCCCCTACACCTAGCTTTGAGTATGAGTATGAAGATCATAATATGCAAGACTTTCAAGATGAAGAGGTTTCACTATGGAATTTTTAA 423 0.4421 MFHTNNSSSSSDMSLSNSEGSHWMSVPNDEMQLAANSVWRLPKPATNEAKDIQKAATEAAELFRPEKTLMTNDNNMVVIAAAATEEQSRLCPEEEEVEAMDMQEMWRNMALMSPTPSFEYEYEDHNMQDFQDEEVSLWNF 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01281 140 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 35 139 IPR045277 GO:0003700
Trre11g01281 140 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01281 Trre-Chr11 12549108 12549758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01281 35 140 AP2-EREBP Transcription Factor Family AT4G25470 36.283 8.43e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01281 - K09286 mtr:25497241 112.849