Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01251 ATGTCTTCAAAACATAATGATACATTTGCTCAAATTAAAACATGCATATACCTGCCTCCGCGGGTAAATTCGCAGAAGCCATGGTTTCAAATGGCCGATACTCGTTGGTTTTTAGGAAATTCTTTGCCTGTATTGCAGATACAGATGTGTTTGATCTTTTTTGGAACTCTTTTCTTCAAATCTATATTATGTCGTTTTGGAATCCCCAAGTTCACATCTATGAGCATTGTTGGTCTAATATTTGCCGCTACATTCAATAATAATTGGACTGGAAAAATGAAGATGTTATTTTCCTTTGAATCACAAGAAAATCTAGGACTAATATCAATATTTGGTTACATGCTTTTCCTATTCTACATTGGTGTCAAAACAGATATGAGTGTTGTCCACAAAACTAAAAGTGGTGTAACCAACATAGGTTCTATTGCTATAATAGCTCCATATCTATGTAGTATGGTTGTTCTAAATTCCTACTCATCAAAATACCTACAACCTTTGGAAGTGAACATCCTTGGAGCTATCATTGGATTGTTCTGTATGGTGTCTTTTCCTGTAATTTCCTCAACTTTAAGTGATATAAAGATTCTCAATTCAGAATTGGGTCGAATCGGTCTATCAGCATCATTAGTTAGTGAGATTTTCAATGTGTTCTTAGCATCATTGATAACATTTTCTAAATTATACGAAGAGCGTGGTCAAAAGAATGCTTTGATTTGCGTTGCAGCCGCTATCTTCTATATACTCATGGTTATATTCATTATTCGACCTGCGATGTTTTGGATTATAAAACAAACACCGGAAGTCATTGTTCTTGTCAAATTTATTGCTTGTATGGTAATTCCTTTACGTTTTGGGATGCCATGGAATGATGCTATTTGTTTATCTTTGATTATGAGTTCTAAAGGTGTTGTGGAAATGGCTGCTTTCTCTTTGGTCAGAGATTCTAAAGGTCTACCAGACAACATTTATTCATTATTGATGATGTGCATCATAGTAAACGGAACATTAATTCCGATGATGTTGCGTTATATGTACGATCCAACAAAGAAATACGCCGGTTACACAAAGAGAAACATAATAGATCTAAAAAGTAACTCGGAATTTCGAGTTTTAACATGTATTCATAGACCAGACAACATTCCAGCAACAATAAATCTTCTAGAAGCAACATATCCAACAAAAGAAGAACCAATTTGCACTTATGCACTTCAACTTGTTGAATTAATAGGAAGAGCTTCACCAATTTTCATCTGTCATAATCTTCAAAGAAAGAAGAAATTAAATTCAAACACATCAATGGCAGATAAGTTACTAGAATCATTTCAAAGTTTTGAAAGAGAGTTCGAAAATTGTTTAGTTGTCAATGCATTCACAGCTATCTCGCCACTAGAAATGATGTACGACGATATCTGTACATTAGCACTGGATAAGTATACATCGCTTATTATTCTTCCTTTTCATCGAAAATGGTCTTGCGATGGTAACTCTATCGAGCTAGAAGATGAGTCATTAAGGGATATAAACTATAGAGTTATGGAAAGAGCACCATGTGGGAAAGATGATAGAGAAGCACTCTTTTTCACAAAGAGAATGTCTAAGAATCCACATGTTAAACTTACTGTGGTTCGATTCTTGTCATCCGATGATGTTGATGAAGATTCGAACGGAAATGCAGGTTGGGAGTGTTTACTTGATAATGAACTATTAGATGAAATTAAGACAAAGAATAAAATTGGTAATGTTAGTGTTACATATATTGAAGAAAAAGTGAAAGATGGACCACAAACAGCATTGATTATAAGATCTTATGTAACAGAATTTGATTTGATTATTGTTGGGAGACATGCTGGAGTTGAAACTCCTCAAACTTGTGGATTGTTGCAATGGAGTGAGTATCCTGAACTTGGTGTTTTGGGAGATTTGTTGGTTTCTACTGATGCTGGTGGAAAAGCTTCTGTTTTTGTTATACAGCAACAAAGAACAGCCAAGGATGTTTAA 1998 0.3458 MSSKHNDTFAQIKTCIYLPPRVNSQKPWFQMADTRWFLGNSLPVLQIQMCLIFFGTLFFKSILCRFGIPKFTSMSIVGLIFAATFNNNWTGKMKMLFSFESQENLGLISIFGYMLFLFYIGVKTDMSVVHKTKSGVTNIGSIAIIAPYLCSMVVLNSYSSKYLQPLEVNILGAIIGLFCMVSFPVISSTLSDIKILNSELGRIGLSASLVSEIFNVFLASLITFSKLYEERGQKNALICVAAAIFYILMVIFIIRPAMFWIIKQTPEVIVLVKFIACMVIPLRFGMPWNDAICLSLIMSSKGVVEMAAFSLVRDSKGLPDNIYSLLMMCIIVNGTLIPMMLRYMYDPTKKYAGYTKRNIIDLKSNSEFRVLTCIHRPDNIPATINLLEATYPTKEEPICTYALQLVELIGRASPIFICHNLQRKKKLNSNTSMADKLLESFQSFEREFENCLVVNAFTAISPLEMMYDDICTLALDKYTSLIILPFHRKWSCDGNSIELEDESLRDINYRVMERAPCGKDDREALFFTKRMSKNPHVKLTVVRFLSSDDVDEDSNGNAGWECLLDNELLDEIKTKNKIGNVSVTYIEEKVKDGPQTALIIRSYVTEFDLIIVGRHAGVETPQTCGLLQWSEYPELGVLGDLLVSTDAGGKASVFVIQQQRTAKDV 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01251 665 Pfam Sodium/hydrogen exchanger family 268 341 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre11g01251 665 Pfam Sodium/hydrogen exchanger family 50 263 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre11g01251 665 PANTHER CATION/H + ANTIPORTER 270 517 - -
Trre11g01251 665 Gene3D - 268 352 IPR038770 -
Trre11g01251 665 Gene3D - 44 267 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01251 Trre-Chr11 12173918 12177053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01251 271 660 Antiporter Super Family AT5G22900 39.675 2.46e-104 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01251 K26731 - gmx:100785558 558.14