Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01214 ATGTTTTACTTGCCAAAACATGATGAGATTGGAAAAATTCTGAAAGTGGAATGTACTCCCACATTAGGAGAGACAGATGTCTTTGGTTTTTTCAGGCTTGGGTGGCTGCTCCGTTTCATTAGCCATTCTATAATCTCTGGCTTTACATCTGCTTCAGCTATTGTGATTGGTTTATCTCAAGCAAAGTACTTTTTGGGGTACGATATAGACAGAAGTAGCAAGATTATACCGTTAGTTAAAAGTATAATAGCTGGAGCTGATAAGTTTTCATGGCCCCCTTTTGTATTGGGATCAATTATGCTTGCAATACTTCTTGTCATGAAACACCTGATGCCAAATAAAGCTACAGAAAAGGCTTCCAAGAATCATAAATTAAAACATCTCAAACGTTCAAGTCAACAAATGTCATCTCATGATGCAACTCCTCATACTATGCCATCAACTACTAGGACATCTAATGGCACACACACTAATACTGCTCCTCATATAAGGGAGTCTGCTGCTAGGACATCTAATAACCCTCCTCCTCACGTTGCAACTGCTACTAGGACATCTAATATCCCACCTCCTGAAGTTGCATCTACTGTTAGGACATCAAATGTTCCACATCATCATGTTCCTCATGCTTCATGTGCTACTAGGACATCTAATATCATACCTCCATTTAGTTCACAACCATGTGATTCTGAGACACAAAGTAGTGGCGGAAAGCAAACTTTAATACTTGAGTTACAGGGATTTTTGCCTTCGTATGCTGCAGCTAATGAGATTGGAGATATCATGAGGAGTAATTATAGTCAGCCATGGTACTCATGGAAAAAGATAGACACTGACACAATAGACTTATGGTTTAAAGCTTTTAAGACAAAGTTTAAATTTTGTCCGCCGAATGATGCATGGGCTAGAAAGAACTTTGAAAGACGAGGTGCAGCAATAATGAAAAATAACTTAAGCAAGGTTCGTCTCGCAAGGAAAAGACCAAGTTGGATTTCTCAAAAACTGTGGAAGACATTAAATGAGCATTGGAAAACTCCAGATTATAAAAAGAAGCGTATGCAGGCGAAAACAAATAGAGCATTTGACCGTGACGGTTTTGGAAAGCCCCTTCACACTTGTGGCTCTATCACCACATCACAACATAGAGCTAATTTGACGGAAACGAATGGCACTCCCCCCGATCCCGTAGATTTGTTTGTTTACACACACCAACATCGCAAGAATAAGACTTGGGTTGATCGAAAATCGGAACATGTCTACGGAAAGTATAAACATAGATGGGAAGAATTAACCCAACAAGCATCTTTGGAAGGAAATCCGCCACCAAAGGAAATAGATGTGTGGACTGAGGTTGCAGGAATAAGGAAAGGACGTGTATATGGTCTTGGGAGTGAATCTTGTTTATTTGCAAGCCGGCGAAATTACTGTGGTTCAAGTTCCTCTTCAACTGAATGGGTGCAAAGACATGAATTTGAAGAAATGAAGTTTGAAAGGGATGAACTTCGTGATATGGTAAAACAATTAATGGAAAGGTTGAAGTTTAAGCCCAAGCCATATACTAGAGATCAAGTTCATGAAGATAATGTGGTTGATGATAATGAGGATATAGTTGATAATAATGATGATACTGAAGATGTGGTTGATAATAATAATGATAATTCCGATGGTAATTCTGATGATAACGATGGCATGTCTGATGATGACGATGGCATGTCTGATGATGATGATGATGATGATGGCATGTCTGATGAGGAAAGCTGTTAG 1761 0.3907 MFYLPKHDEIGKILKVECTPTLGETDVFGFFRLGWLLRFISHSIISGFTSASAIVIGLSQAKYFLGYDIDRSSKIIPLVKSIIAGADKFSWPPFVLGSIMLAILLVMKHLMPNKATEKASKNHKLKHLKRSSQQMSSHDATPHTMPSTTRTSNGTHTNTAPHIRESAARTSNNPPPHVATATRTSNIPPPEVASTVRTSNVPHHHVPHASCATRTSNIIPPFSSQPCDSETQSSGGKQTLILELQGFLPSYAAANEIGDIMRSNYSQPWYSWKKIDTDTIDLWFKAFKTKFKFCPPNDAWARKNFERRGAAIMKNNLSKVRLARKRPSWISQKLWKTLNEHWKTPDYKKKRMQAKTNRAFDRDGFGKPLHTCGSITTSQHRANLTETNGTPPDPVDLFVYTHQHRKNKTWVDRKSEHVYGKYKHRWEELTQQASLEGNPPPKEIDVWTEVAGIRKGRVYGLGSESCLFASRRNYCGSSSSSTEWVQRHEFEEMKFERDELRDMVKQLMERLKFKPKPYTRDQVHEDNVVDDNEDIVDNNDDTEDVVDNNNDNSDGNSDDNDGMSDDDDGMSDDDDDDDGMSDEESC 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01214 586 Pfam Plant transposase (Ptta/En/Spm family) 332 463 IPR004252 -
Trre11g01214 586 MobiDBLite consensus disorder prediction 518 586 - -
Trre11g01214 586 Pfam Sulfate permease family 27 114 IPR011547 GO:0016020
Trre11g01214 586 MobiDBLite consensus disorder prediction 116 195 - -
Trre11g01214 586 MobiDBLite consensus disorder prediction 558 586 - -
Trre11g01214 586 Coils Coil 490 510 - -
Trre11g01214 586 PANTHER SULFATE TRANSPORTER 27 112 IPR001902 GO:0016020|GO:0055085
Trre11g01214 586 MobiDBLite consensus disorder prediction 134 195 - -
Trre11g01214 586 MobiDBLite consensus disorder prediction 530 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01214 Trre-Chr11 11686779 11692048 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01214 27 110 Inorganic Solute Cotransporters AT5G13550 77.381 1.39e-36 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01214 - - tpra:123913621 517.694