Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01213 ATGTTTTACTTGCCAAAACATGATGAGATTGGAAAAATTCTGAAAGTGGAATGTACTCCCACATTAGGAGAGACAGATGTCTTTGGTTTTTTCAGGCTTGGGTGGCTGCTCCGTTTCATTAGCCATTCTATAATCTCTGGCTTTACATCTGCTTCAGCTATTGTGATTGGTTTATCTCAAGCAAAGTACTTTTTGGGGTACGATATAGACAGAAGTAGCAAGATTATACCGTTAGTTAAAAGTATAATAGCTGGAGCTGATAAGATGCCAAATAAAGCTACAGAAAAGGCTTCCAAGAATCATAAATTAAAACATCTCAAACGTTCAAGTCAACAAATGTCATCTCATGATGCAACTCCTCATACTATGCCATCAACTACTAGGACATCTAATGGCACACACACTAATACTGCTCCTCATATAAGGGAGTCTGCTGCTAGGACATCTAATAACCCTCCTCCTCACGTTGCAACTGCTACTAGGACATCTAATATCCCACCTCCTGAAGTTGCATCTACTGTTAGGACATCAAATGTTCCACATCATCATGTTCCTCATGCTTCATGTGCTACTAGGACATCTAATATCATACCTCCATTTAGTTCACAACCATGTGATTCTGAGACACAAAGTAGTGGCGGAAAGCAAACTTTAATACTTGAGTTACAGGGATTTTTGCCTTCGTATGCTGCAGCTAATGAGATTGGAGATATCATGAGGAGTAATTATAGTCAGCCATGGTACTCATGGAAAAAGATAGACACTGACACAATAGACTTATGGTTTAAAGCTTTTAAGACAAAGTTTAAATTTTGTCCGCCGAATGATGCATGGGCTAGAAAGAACTTTGAAAGACGAGGTGCAGCAATAATGAAAAATAACTTAAGCAAGGTTCGTCTCGCAAGGAAAAGACCAAGTTGGATTTCTCAAAAACTGTGGAAGACATTAAATGAGCATTGGAAAACTCCAGATTATAAAAAGAAGCGTATGCAGGCGAAAACAAATAGAGCATTTGACCGTGACGGTTTTGGAAAGCCCCTTCACACTTGTGGCTCTATCACCACATCACAACATAGAGCTAATTTGACGGAAACGAATGGCACTCCCCCCGATCCCGTAGATTTGTTTGTTTACACACACCAACATCGCAAGAATAAGACTTGGGTTGATCGAAAATCGGAACATGTCTACGGAAAGTATAAACATAGATGGGAAGAATTAACCCAACAAGCATCTTTGGAAGGAAATCCGCCACCAAAGGAAATAGATGTGTGGACTGAGGTTGCAGGAATAAGGAAAGGACGTGTATATGGTCTTGGGAGTGAATCTTGTTTATTTGCAAGCCGGCGAAATTACTGTGGTTCAAGTTCCTCTTCAACTGAATGGGTGCAAAGACATGAATTTGAAGAAATGAAGTTTGAAAGGGATGAACTTCGTGATATGGTAAAACAATTAATGGAAAGGTTGAAGTTTAAGCCCAAGCCATATACTAGAGATCAAGTTCATGAAGATAATGTGGTTGATGATAATGAGGATATAGTTGATAATAATGATGATACTGAAGATGTGGTTGATAATAATAATGATAATTCCGATGGTAATTCTGATGATAACGATGGCATGTCTGATGATGACGATGGCATGTCTGATGATGATGATGATGATGATGGCATGTCTGATGAGGAAAGCTGTTAG 1695 0.3906 MFYLPKHDEIGKILKVECTPTLGETDVFGFFRLGWLLRFISHSIISGFTSASAIVIGLSQAKYFLGYDIDRSSKIIPLVKSIIAGADKMPNKATEKASKNHKLKHLKRSSQQMSSHDATPHTMPSTTRTSNGTHTNTAPHIRESAARTSNNPPPHVATATRTSNIPPPEVASTVRTSNVPHHHVPHASCATRTSNIIPPFSSQPCDSETQSSGGKQTLILELQGFLPSYAAANEIGDIMRSNYSQPWYSWKKIDTDTIDLWFKAFKTKFKFCPPNDAWARKNFERRGAAIMKNNLSKVRLARKRPSWISQKLWKTLNEHWKTPDYKKKRMQAKTNRAFDRDGFGKPLHTCGSITTSQHRANLTETNGTPPDPVDLFVYTHQHRKNKTWVDRKSEHVYGKYKHRWEELTQQASLEGNPPPKEIDVWTEVAGIRKGRVYGLGSESCLFASRRNYCGSSSSSTEWVQRHEFEEMKFERDELRDMVKQLMERLKFKPKPYTRDQVHEDNVVDDNEDIVDNNDDTEDVVDNNNDNSDGNSDDNDGMSDDDDGMSDDDDDDDGMSDEESC 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01213 564 MobiDBLite consensus disorder prediction 112 168 - -
Trre11g01213 564 Pfam Sulfate permease family 27 89 IPR011547 GO:0016020
Trre11g01213 564 MobiDBLite consensus disorder prediction 496 564 - -
Trre11g01213 564 PANTHER SULFATE TRANSPORTER 27 85 IPR001902 GO:0016020|GO:0055085
Trre11g01213 564 Coils Coil 468 488 - -
Trre11g01213 564 MobiDBLite consensus disorder prediction 536 564 - -
Trre11g01213 564 Pfam Plant transposase (Ptta/En/Spm family) 310 441 IPR004252 -
Trre11g01213 564 MobiDBLite consensus disorder prediction 508 526 - -
Trre11g01213 564 MobiDBLite consensus disorder prediction 90 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01213 Trre-Chr11 11686779 11692048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01213 27 89 Inorganic Solute Cotransporters AT5G13550 79.365 2.40e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01213 - - tpra:123913621 520.776