Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01210 ATGGAGGACCCAAAACAAGATACCCAAATGGAAATTGAAGCAGAAAAATCACCCCTCTTAGAAAATAACTATGTTCCTCAAGTTTTGTCACAAAAAATGGAAGAGAAAATGAAAAGGAAAAAATCAGAGAGGTTTACTTATCTTATTGCAGCGGTTATGTCTAGTCTTGGTATAACATCTATGGCTGTGTTGGCTGTTTATTATAGATTTTCATGGCAAATGGAGGGTAGTGGAGAAATTCCATGGTCAGAAATGTTTGGTACATTTGCTCTATCAGTGGGTGCTGCTGTGGGTATGGAGTTTTGGGCTAGATGGGCTCACAAGGCTCTTTGGCATGCTTCTTTATGGCACATGCATGAGTCCCATCATAGAGCAAGAGAAGGAGCTTTTGAGTTGAATGATGTTTTTGCAATAATCAATGCTGTCCCTGCTATCGCTCTCCTTAACTTTGGTTTCTTCCACAAAGGTCTCGTCCCTGGTCTTTGCTTCGGTGCGGGTCTTGGGATTACGGTGTTTGGGATGGCCTACATGTTTGTACACGACGGATTGGTTCATAAGAGATTCTCAGTGGGACCCATTGCCAATGTACCCTATTTCAGAAGGGTAGCTGCTGCCCACAAACTTCACCATTCGGACAAATTTGATGGGGTGCCATATGGGCTGTTTTTGGGACCAAAGGAACTTGAAGAGGTAGGAGGGCTAGAAGAGCTAGAAAAAGAGATAAGTAGGAGGACAAAATCATACAATAATAGTTCATGA 759 0.4242 MEDPKQDTQMEIEAEKSPLLENNYVPQVLSQKMEEKMKRKKSERFTYLIAAVMSSLGITSMAVLAVYYRFSWQMEGSGEIPWSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRAREGAFELNDVFAIINAVPAIALLNFGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFSVGPIANVPYFRRVAAAHKLHHSDKFDGVPYGLFLGPKELEEVGGLEELEKEISRRTKSYNNSS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01210 252 Coils Coil 234 252 - -
Trre11g01210 252 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 14 248 IPR045019 GO:0016491
Trre11g01210 252 Pfam Fatty acid hydroxylase 95 222 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01210 Trre-Chr11 11563731 11566646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01210 1 165 Chloroplast and Mitochondria Gene Families AT4G25700 68.675 1.52e-78 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01210 K15746 - pvy:116107134 417.157