Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01204 ATGCCTTTTGATATTTGTGGGTTTACTCATTTGAGATCATTGAACTTGTTTATTGTGGGTTCGAAGACTGGGTTTGGTGTAGCAGAGCTACGTAAGTTACGACTAGGAGGCAAGCTACACATTAAAGGCCTTGAGAATGTGTCGAATGAAACAGATACTAGCGAAGCTAATTTAATTGGTAAGAAGGAATTAAGTGATTTATACTTGTCATGGCGTATTCATGGTAATTCAAGTGTCAGTGTTACTGTCGCTGAGCAAGTCCTTGAAGCCGTTGAGCCTTACACAGGTCTCAAATATTTTGGGATGGATGGTTATATGGGAATAAATATTCCAAATTGGATGAGAAATACTTCTATTTTGGAAGGCTTGGTTGAGGTTAAACTTTCCGAATGCAGAAATTTTGCGCGGCTTCCTCCACTTGGTAAATTACCATGTTTAACAACTCTTCACGTGTCTAGAATGAGAGAATTGAAGTACATTGATGATGACTTGTATGAAGGTGCGACCAAGAAGGCTTTTCCATCATTAAAGAAAATGGAGTTACATGATTTACCAAAATTAGAGAAGGTGTTGAAAGCTGAAGGAGTAGAGATGCCACAACTTTCTGACTTGAACATATATGGGACCCCTAAGCTTAATGCATTTCCATCCCTTCCATCTGTTGAGACTTTTGAAGCTAATAGGGATACTGAAAGAGATTCCATTGATGGTGGTGCACCTTTCCTGAGGGGAATTGCAGCTAGTATGCATAATCTCAAAAAACTTGTGATTAATTACGTTAATGAACTCAAGGTACTACCTAATGAACTCAACTCTCTCAGTTCCCTACAAGAACTACACATTTATACTTGTGATAAGCTTGAGTCTATCCCCGAGTGTGTACTGCAAGGTTTGAGTTCTCTTCAAGATTTGAAATTTACATGTTGCAGAAGCTTAAAATCCTTGCCGGAAGGTACAAACCTGACTTCTCTTCAAACATTACGAATCATTGATTGTCCCAAATTAAGCTCATTACCAGCTAGCTTTAAAGAACTCATAAACTTGAAAGAATTATATATTTATGGGACCCCTAAGCTTAATGCATTTCCATCCCTTCCATCTGTTGAGACTTTTGAAGCTAGAAGGGATACTGAAAGAGATTCCATTGATGGTGGCGCATCTTTCCTGCAGGGAATTGCAGCTAGTATGCATAATCTCAAAACACTTTCCATTGTAGGCTTTGATGAACTCAAGGTACTACCTAATGAACTAAACTCTCTCAGTTCCCTAAAACAACTACACATTAGAAGTTGTGATAGGCTTGAGTCTATCCCCGAGTGTGTATTTCAAGGTTTGGGTTCTCTTCAACTTTTGGACTTTGCATGGTGCAGTAGCTTAAAATCCTTGCCGGAAGGTACAAACCTGACTTCTCTTCAAACATTAAATATCTATGATTGTCCCAAATTAAGCTCATTACCAGCTAGCTTTAAAGAACTCATAAACTTGCATGAATTACACATCCATAGATGTCCTGTGTTGGAGAAGCGATGCAAGAATGAAACAGGGGAAGATTGGCATAAGATAGATCATGTACCAAAATTGAGGGTGGAATCTTACAGAGGAATGAGTGAAGAGCATGGATATGGATTTCACTCTTGA 1638 0.3871 MPFDICGFTHLRSLNLFIVGSKTGFGVAELRKLRLGGKLHIKGLENVSNETDTSEANLIGKKELSDLYLSWRIHGNSSVSVTVAEQVLEAVEPYTGLKYFGMDGYMGINIPNWMRNTSILEGLVEVKLSECRNFARLPPLGKLPCLTTLHVSRMRELKYIDDDLYEGATKKAFPSLKKMELHDLPKLEKVLKAEGVEMPQLSDLNIYGTPKLNAFPSLPSVETFEANRDTERDSIDGGAPFLRGIAASMHNLKKLVINYVNELKVLPNELNSLSSLQELHIYTCDKLESIPECVLQGLSSLQDLKFTCCRSLKSLPEGTNLTSLQTLRIIDCPKLSSLPASFKELINLKELYIYGTPKLNAFPSLPSVETFEARRDTERDSIDGGASFLQGIAASMHNLKTLSIVGFDELKVLPNELNSLSSLKQLHIRSCDRLESIPECVFQGLGSLQLLDFAWCSSLKSLPEGTNLTSLQTLNIYDCPKLSSLPASFKELINLHELHIHRCPVLEKRCKNETGEDWHKIDHVPKLRVESYRGMSEEHGYGFHS 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01204 545 Gene3D Ribonuclease Inhibitor 1 233 IPR032675 -
Trre11g01204 545 SUPERFAMILY L domain-like 246 521 - -
Trre11g01204 545 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 391 511 - -
Trre11g01204 545 SUPERFAMILY L domain-like 27 225 - -
Trre11g01204 545 Gene3D Ribonuclease Inhibitor 234 381 IPR032675 -
Trre11g01204 545 Gene3D Ribonuclease Inhibitor 382 515 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01204 Trre-Chr11 11526736 11528373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01204 241 492 WRKY Transcription Factor Family AT5G45050 25.385 1.61e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01204 - - mtr:25496493 386.726