Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01154 ATGGAGAATCCTTCAACCAATAACAAAATTGGCATTACAAGACAATCTCTTAATGTAGAGGCCCATACACAAGGGAACCCTAAGTCTATCCTTAAGATGATGGCGGTGGCCTCCATCGCTGCCGGCATCCAATTCGGGTGGGCCCTACAACTATCCTTGTTAACACCATACATCCAACTGTTGGGAGTTCCACATAAGTGGGCTTCCAACATTTGGTTATGCGGTCCAATTTCTGGCATGATTGTCCAGCCACTCGTTGGCTTCTACAGTGACCGAAGCACTTCACGTTTCGGTCGTCGTCGCCCCTTCATTTTCTTCGGTGCCATCGCAGTTGCAATTGCAATCTTTCTCATTGGCTACGCTGCCGATCTTGGTCACTCGATGGGTGACGACTTGACGAAGAAAACACGGCCCCGTGCGGTGGTAATATTTATCTTGGGCTTCTGGGTACTTGATGTCGCCAATAATATGCTCCAGGGACCTTGTCGTGCGTTTATTGGTGACCTCGCCGCAGGTGACCACCGTCGAATGAGAACCGGAAATGCGTTGTTCTCGTTTTTCATGGCTGTCGGTAATGTCCTTGGTTATGCTGCTGGCTCCTACAACAAACTCCACGAAAAGTTTCCTTTCACACAAACCAAAGCTTGCAACGAGTTTTGCGCAAACCTCAAAACATGTTTTTTCTTCTCAATATTCTTCCTTGTCGTGCTTTCTACCTTCGCTCTACTTTATGTAGAAGACATCCCAATTACATCGTCAAAATCACAATCAGAATCAGAACCACAGGTTTCTTCTTTCGGCGAGTTGCTAGGTGCATTCAATGGACTCCAGAAACCGATGTGGTTGCTGATGCTAGTGACAGCCATCAATTGGATTGCATGGTTCCCATTCTTCTTGTTCAGCACTGATTGGATGGGTCTTGAAGTGTATGGTGGAAATCCAGGAGATAAGGCATACAGCAAAGGAGTGCAAGCGGGGGCATTGGGACTCATGATCAATGCTATTGTGCTTGGTTTCATGTCGTTGACGGTTGAACCGTTGGGGCGATTTGTTGGGGGTGCGAAGAGGTTGTGGGGGGTTGTAAATATCATTCTCTCTATTGCACTTGCAATGACAGTACTCATCACCAAGGCATCAGAACATGAACGTCACATCAGTAATGTCGTTGGAAAACCCTCTCATGGTGTTAAGGCTGCAGCGTTCTCTTTCTTCGGCATCCTTGGAATCCCTCTTGCAATTAATTTCAGTATTCCATTTGCTTTAGCATCTATTTATTCTAGCTCATCAGGGGCTGGACAAGGTTTATCTTTGGGAGTCCTCAATATTTCAATTGTGGTTCCACAGATGATAGTATCGGCATTAAGTGGACAATGGGATTCTTTGTTTGGTGGTGGCAACTTGCCAGCGTTTGTGGTCGCTGCCGTGGCGGCGTTCATCAGTGCTATATTGGCTATCGTCCTTCTACCTTCTCCAAAGCCGGAAGATATGGCTAAGGCTTCCGTTGGAGGTGGTTTTCATTAA 1521 0.4661 MENPSTNNKIGITRQSLNVEAHTQGNPKSILKMMAVASIAAGIQFGWALQLSLLTPYIQLLGVPHKWASNIWLCGPISGMIVQPLVGFYSDRSTSRFGRRRPFIFFGAIAVAIAIFLIGYAADLGHSMGDDLTKKTRPRAVVIFILGFWVLDVANNMLQGPCRAFIGDLAAGDHRRMRTGNALFSFFMAVGNVLGYAAGSYNKLHEKFPFTQTKACNEFCANLKTCFFFSIFFLVVLSTFALLYVEDIPITSSKSQSESEPQVSSFGELLGAFNGLQKPMWLLMLVTAINWIAWFPFFLFSTDWMGLEVYGGNPGDKAYSKGVQAGALGLMINAIVLGFMSLTVEPLGRFVGGAKRLWGVVNIILSIALAMTVLITKASEHERHISNVVGKPSHGVKAAAFSFFGILGIPLAINFSIPFALASIYSSSSGAGQGLSLGVLNISIVVPQMIVSALSGQWDSLFGGGNLPAFVVAAVAAFISAILAIVLLPSPKPEDMAKASVGGGFH 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01154 506 CDD MFS_SLC45_SUC 33 485 - -
Trre11g01154 506 PANTHER SUGAR TRANSPORTER 28 487 - -
Trre11g01154 506 SUPERFAMILY MFS general substrate transporter 33 494 IPR036259 -
Trre11g01154 506 FunFam Sucrose transporter SUC2 31 252 - -
Trre11g01154 506 NCBIfam sucrose/proton symporter 30 493 IPR005989 GO:0005886|GO:0008515|GO:0015770
Trre11g01154 506 Gene3D MFS general substrate transporter like domains 28 499 IPR036259 -
Trre11g01154 506 Pfam MFS/sugar transport protein 37 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01154 Trre-Chr11 11026799 11029939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01154 5 506 Sucrose Transporter Gene Family AT1G71890 62.549 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01154 K15378 - gmx:100782007 677.552