Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01149 ATGGCAAGAATTAGTGGAAGTAAATCTTCTTCATTGTTTTTTATTTCTTTTCTATTAGCTTCTTTAGTCCTTGTTTCCTCTGAGGGACTAGCAAGACCTCCCATTGTGAGGGGACTAGATTGGAATTATTATTTGTTGTCATGTCCTAGGGTTGAAAGGATCGTGAGGAAACATCTTGAAGACGTGTTCGAAAAAGATAGCGGAGTAGCTCCTGGCATACTCCGCCTCTTCTTCCATGACTGCTTTTCTCAGGGATGCGATGCATCAATTTTGTTGAAAGGTGATGGAATAGAACCAATTGAAAGAAATCACACTTCCAACTTTGGCTTAAGAGATGGAGCTATTCAGGCCATTGAAGATATACGTGCTATTATTCGTGCGCAGTGTCCGCGTGTTGTTTCGTGCGCAGACATCCTCGTCATTGCTGCACGCGAAGCTGTTCGCCAGTTTGGAGGCCCAGATTTTGATGTACCATTGGGAAGAAAAGACAGCCTAGATTTTGATATAGATGCAGCAGACAATCTGCCAGCACCATTTGAAAAAACTGATGAACAATTAAGTAATTTTTTTGAACGAAACAAATTTGATGCCACAGATGTAGTTGCTTTATCTGGGGCACACACATTTGGTCAAGCACATTGTTTTGCATTATTCAATAGAACCACTGATCCAAGCCCACCAATTGATCCAGATTTCAATAATCAACTTGTAGCTACATGCCCTGCAGACAAACAATTTATTAACACTGTTAATTTGGATATTAGAACACCAACACAATTTGATAACATGTATTACATTAATCTTTTGAATCATCAGGGTGTTTTTACATCTGATCAAGATTTGGCAAGTCATCCTAAGACTAAGGAGATTGTGAACCGGTTTGCTTCTAACCAAAAAGAGTTTTTTGACAAATTTGCTAATGCTTTTGTTAAGGTTAGTCAATTGGATGTTTTGACCGGAAATCAAGGAGAAGTTCGTAAGTCATGTTTTGCTCCGAATAAAAAGAAATTTAATGTCGCATCTATGGTGGAAGAGGTTGTGGGAATTGCAGCGAACATGTAG 1062 0.3908 MARISGSKSSSLFFISFLLASLVLVSSEGLARPPIVRGLDWNYYLLSCPRVERIVRKHLEDVFEKDSGVAPGILRLFFHDCFSQGCDASILLKGDGIEPIERNHTSNFGLRDGAIQAIEDIRAIIRAQCPRVVSCADILVIAAREAVRQFGGPDFDVPLGRKDSLDFDIDAADNLPAPFEKTDEQLSNFFERNKFDATDVVALSGAHTFGQAHCFALFNRTTDPSPPIDPDFNNQLVATCPADKQFINTVNLDIRTPTQFDNMYYINLLNHQGVFTSDQDLASHPKTKEIVNRFASNQKEFFDKFANAFVKVSQLDVLTGNQGEVRKSCFAPNKKKFNVASMVEEVVGIAANM 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01149 353 PANTHER - 28 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 FunFam Peroxidase 176 312 - -
Trre11g01149 353 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Trre11g01149 353 ProSiteProfiles Plant heme peroxidase family profile. 38 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 Gene3D Peroxidase, domain 2 177 313 - -
Trre11g01149 353 FunFam Peroxidase 42 187 - -
Trre11g01149 353 Pfam Peroxidase 55 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 Gene3D - 42 329 - -
Trre11g01149 353 SUPERFAMILY Heme-dependent peroxidases 38 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 CDD secretory_peroxidase 38 331 IPR033905 GO:0004601|GO:0042744
Trre11g01149 353 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Trre11g01149 353 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01149 353 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01149 Trre-Chr11 10955292 10957334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01149 12 353 Peroxidase AT1G71695 45.559 1.81e-99 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01149 K00430 - gmx:100795412 442.58