Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01148 ATGGCTAAGAATAGTGCTTCCATCACTTGTTTCTACTCTTTGCTCTTAGTATCTTCCATTCTATTTGCTTCATACTTTCATGCTTCTGAGGCACAAGCCCCAGTAGTGAAAGGTTTAGCTTATAATTTCTTTGCCCAAACATGTCCCAATCTTGAAAACATTGTGAGAAACCATCTTACTAAGGTTTTGAAATCCGACAATGGCCAAGCTCCTGGCTTACTCCGTATCTTTTTCCATGATTGCTTTGTTCAGGGATGTGATGGATCCTTGTTGTTGGATGGGAATCCAGGTGAAAGGGACCAACCACCAAATGCAGGTATGAGAACAGAAGCCTTGAAAACCATTGACGACATTAGAGCTCTTGTCCATAAAGAGTGTGGAAGGACAGTCTCTTGTGCTGACATAACTGTCTTAGCTGCTCGTGAAGCTGTTTTCCTATCAGGAGGACCCAATTTTCCAGTACCATTAGGAAGAAAAGATGCTAAAACCTTTAGCAATGCATTAACAAAAAATCTTCCACAACCCTTCAACAAAACAAGTGTAACACTAAAAGTATTTGCAGCACAAAACTTTGATGTAACAGATGTTGTTGCATTATCAGGTGCACACACATTTGGTCGTGCACATTGTGGTACATTTTTCAATAGACTTTCACCAGTGGACCCCACATTGGACCAAACCTTAGCCAAAAACCTTAAAGCAACTTGTCCTAGTGCAAGTTCAGGTAACACTGCAAATTTGGACCTTAGAACCCCAACAGTTTTTGACAACAAATACTACCTTGATTTAATGAACAAACAAGGTTTGTTTACATCTGACCAAGATTTGAACATTGATTCAAGGACAAAAGGATTAGTTAATGATTTTGCTGTTAATCAAAATTTGTTCTTTGAGAAGTTTGCTAATGCTTTTATTAAGGTTAGTCAGTTGAATGTTACAGTTGGTAATCAAGGCGAAATTCGTGCTAAGTGTAATGTGGTAAATGGTGCTAAGAAATCTGTTTTGAAAACTTTGGTTGAAGAGGGATTGGAATTGATTGATCAGTTTTAA 1050 0.3819 MAKNSASITCFYSLLLVSSILFASYFHASEAQAPVVKGLAYNFFAQTCPNLENIVRNHLTKVLKSDNGQAPGLLRIFFHDCFVQGCDGSLLLDGNPGERDQPPNAGMRTEALKTIDDIRALVHKECGRTVSCADITVLAAREAVFLSGGPNFPVPLGRKDAKTFSNALTKNLPQPFNKTSVTLKVFAAQNFDVTDVVALSGAHTFGRAHCGTFFNRLSPVDPTLDQTLAKNLKATCPSASSGNTANLDLRTPTVFDNKYYLDLMNKQGLFTSDQDLNIDSRTKGLVNDFAVNQNLFFEKFANAFIKVSQLNVTVGNQGEIRAKCNVVNGAKKSVLKTLVEEGLELIDQF 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01148 349 SUPERFAMILY Heme-dependent peroxidases 34 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Trre11g01148 349 CDD secretory_peroxidase 38 327 IPR033905 GO:0004601|GO:0042744
Trre11g01148 349 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PRINTS Haem peroxidase superfamily signature 70 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 Pfam Peroxidase 55 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PANTHER - 29 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 FunFam Peroxidase 173 307 - -
Trre11g01148 349 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PRINTS Plant peroxidase signature 72 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 PRINTS Plant peroxidase signature 48 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 ProSiteProfiles Plant heme peroxidase family profile. 38 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre11g01148 349 ProSitePatterns Peroxidases active site signature. 70 81 IPR019794 GO:0004601
Trre11g01148 349 Gene3D Peroxidase, domain 2 174 308 - -
Trre11g01148 349 FunFam Peroxidase 42 184 - -
Trre11g01148 349 Gene3D - 42 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01148 Trre-Chr11 10935816 10940252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01148 13 346 Peroxidase AT1G71695 51.170 6.51e-121 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01148 K00430 - gmx:547550 518.464