Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01018 ATGGAGATGAGATGCAAAGAAAATATAGAAATTAGCACAGACATAACACCACCACTCTTACCACTCTCTTTCTCTCTCCACAACACTCATCTCTACACTCACTGCTCCTCTTGTTTCTCTCTCTTAACAACAAACAATTCCCATCCCCCATTCTACTGCTCATCTCAATGCTCCACCGCCTATTCCTCCATCCCTCTCTCCTCCGCCGAACACCACCTTCCTTCCTCCACTACCTCCTCCCTCCTCCGCACCGCACTCCGCCTCCTCCTCCTTTACCCCGACACCACTTCCCTCTCTAATCGATTCAATAATTTACTCACCAACCGTCATTTGCTTACGTGTCAAAACGATGACGTCTCCGAAACTATTCGTCTCGGCGGTCGTGCTATGGCAACCGCAATAGCGAAGCAGAGAAGCGAAAGCGACGGCGGACCGTATGATAATGATGCTGTTTTGGAAATAGCGACGGTTGCTCTTTGTGTTGTGCTAACGAACGCTGTTGAGGTGCACGATAACGATGGATGCGCGCTTGGGATCGCGGTTTATGAACATGCTTTTTCTTGGATTAATCATAGTTGTTCCCCTAATGCTTGTTACCGTTTCTCATTCTCCAATTCTTCTTCTGTGATTTCTCTTGAATCAAAGCTTTGCATTGTTCCGTTCACTCACAATTCTCAACAACTAAAAGGAGATTGTGGAGTTTTTGGTAGCAGAAGTGAATTTGCACAAGAAGGGCGGATGATCTGTGGCCCAAGATTGATTGTGAGGAGTATCAAGAGAATTAAAAAGGGGGAAGAGGTCACTGTAGCATATACTGACCTCCTGCAGCCAAAGGCATTGAGGCAATCAGAACTATGGTCAAAGTATCGGTTTATTTGTTGCTGCAAACGATGTAGTTCTCAGCCCTTCACATACGTGGATCATGCATTGCAAGAAATATCTGTCTCCTGCGGAGATTCATCTGGTTTACATTCCAATTACAATTTCTTCAAAGACACGGCTGATAGAAGATTGACCGATTCAATTGAAGATGTTATATCAGAGTACCTTCTAGTTGGTGATTCTGTGACTTGTTGTGCGAACCTTGAGAAGATTCTCATCGAAGGTCTATATGAGAAGCTAGAGGGAAATGAAACAAAATCACATTTTAAATTTATGCTGCATCCTCTTCACCACCTCTCCTTAAGTTCCTATACAACACTAGCTTCAGCATATAAAGTCTGTGCTAGTGATTTATTATCTGTAGATTCTGAAACAGTTCTTAACCAATCAGAAGCTTTTCATATGAGCAGGACCAGTGCTGCATATTTTTTGTTACTGGCAGGTGCAGCTCATCATCTTTTCATTTCTGAATCATCGCTTATCGCATCGGTTGCTAATTTTTGGATTGGAGCTGGTGAATCTTTGTTAACTCTTACCAGAAATTCAGGATGGAGTAAGTTTGTTAATTTTGATTCGGCTCTGTCAAACCTTGCTTCCAACAATTTTTTAGAATGCTCTAAGTGTTCATTAATGGATAAATTTAAAGCCTGTACATTAAATGGTCAAATCAAAAGTGAAGAATTAGAGAATGTATCAATCGAGTTTATTCATTGTATCTCGGATATTACTCCTAAAGTTTGGAGCTTCCTTGTCTATGGTTCTCATTTTTTACAATTATGTAAAGACCCTATAAATTTCAGTTGGCCAACGTCTTCCGAAAATGACACGTGTTTCACACATGAATCTGAGAATGTCATCAGTGTTCGTGAACAGGCTTACGACGATCAAACAGGAGCACACATTCTTCAGCTTGGTGAACACTGCTTAACATATGGAGGATTATTGGCTTGTATATGTTATGGTCCCCAATCCCATTTGGTTTCTCATTTTCAAAATATTCTAGATCATTAA 1893 0.4126 MEMRCKENIEISTDITPPLLPLSFSLHNTHLYTHCSSCFSLLTTNNSHPPFYCSSQCSTAYSSIPLSSAEHHLPSSTTSSLLRTALRLLLLYPDTTSLSNRFNNLLTNRHLLTCQNDDVSETIRLGGRAMATAIAKQRSESDGGPYDNDAVLEIATVALCVVLTNAVEVHDNDGCALGIAVYEHAFSWINHSCSPNACYRFSFSNSSSVISLESKLCIVPFTHNSQQLKGDCGVFGSRSEFAQEGRMICGPRLIVRSIKRIKKGEEVTVAYTDLLQPKALRQSELWSKYRFICCCKRCSSQPFTYVDHALQEISVSCGDSSGLHSNYNFFKDTADRRLTDSIEDVISEYLLVGDSVTCCANLEKILIEGLYEKLEGNETKSHFKFMLHPLHHLSLSSYTTLASAYKVCASDLLSVDSETVLNQSEAFHMSRTSAAYFLLLAGAAHHLFISESSLIASVANFWIGAGESLLTLTRNSGWSKFVNFDSALSNLASNNFLECSKCSLMDKFKACTLNGQIKSEELENVSIEFIHCISDITPKVWSFLVYGSHFLQLCKDPINFSWPTSSENDTCFTHESENVISVREQAYDDQTGAHILQLGEHCLTYGGLLACICYGPQSHLVSHFQNILDH 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01018 630 Pfam SET domain 183 271 IPR001214 GO:0005515
Trre11g01018 630 SUPERFAMILY SET domain 165 300 IPR046341 -
Trre11g01018 630 PANTHER PROTEIN SET DOMAIN GROUP 41 1 629 - -
Trre11g01018 630 Gene3D SET domain 144 302 IPR046341 -
Trre11g01018 630 CDD SET_SMYD 159 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01018 Trre-Chr11 9314406 9319146 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre11g01018 SET 2.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01018 - - aprc:113867790 713.375