Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01016 ATGAGTAATACTAATCTCATCAAATTCATATTATCAATAACAACATCTTTCTCTCTAACCCAATTAATCCCATACCTGATATGCTTTTTAATTTACCTTCTTTTCCTTGAACAGATCTCATACCTCACCAAAAAAAGGTTAATTCCAGGTCCATCTTTTGTTCTTCCAATCATAGGCAATGCAATCCCATTGGTCCGTGACACAACAAAATTTTGGGAACATCAATCCATTCTAGCCAAATCAACCTCTTTGGGCTTTTCGGTTAACTACATATTAGGCAACTTCATAGTCTTCATTAGAGACACAGAACTCTCTCGTAAGGTTTTCATCAATGCCAAGCCCAACGCTTTTCAGCCCATGGCCCACCCATTTGGTAAGAAGATATTTGGTGAGCATAATCTTCATTACATGTTGGGTGAAGAACACAAGAACTTGCGCCGTCGGATTGCACCCAACTTTACTTTGAAGGCACTTTCGACCTATACCTCCTTGCAGCAGATTATTATTCTCAAACACCTTAAGTCATGGGTTGAGAAAGCCCACGGGGACTCTATTCCACTTCGTGTGCTAGCCCGTGATATGAATTTAGAAACCTCTCAGACTGTTTTTGTGGGCCCTTATTTGGGCCTAAAAGCCCGAGAGATATTTGAGCGTGATTACTTTCTCATTAACATTGGTCTAACAAAGCTTCCCATTGACTTTCCGGGGACTGCATTTTGTAATGCGAGAATCGCGTGTAAACATCTTGCTGAAACCCTAGCTAATTGCACAACAATGAGTAAGGAGAAGATGGAGAAAGGAGAAGAGCCTTTGTGCCTCATTGATTTCTGGATGCAGGATACAATAAGGGAGAATGAGGAATCAAAGGTTAATGGAGTTATGGTGCCGCCGTTTGCCAGCGACGCTGAGATTGGCGGTTATCTCTTTGATTTCCTCTTCGCAGCACAAGATGCATCCACATCGTCATTGTTATGGGCAGTGGTATTGTTAGATTCGCATCCGAAGGTTCTTGCCAAAGTCAGGGAGGAAGTCGCCAGAGTCTGGTCGCCAGAGTCAAACACATTGATAACTTCAGAGCAACTGACAAAATTGAAGTACACGCAAGCGGTTGCGCGTGAGGTTGTTAGGTATAGACCACCAGCAACTGTTGTGCCACATATTGCAACAGAGAAGTTCCCGTTAACAGAATCATACTCGATTCCGAAAGGAACAATTGTTTTTCCTTCGGTGTTCGAGTCATCATTTCAAGGATTTACTAAACCAGATCGGTTTGATCCAGAACGATTCTCAGAAGGAAGAAAAGAGGATCAAATATTTAAAAGAAACTTCCTAGCATTTGGAGTTGGGCCCCACCAATGTGTGGGCCAGAGATACGCTTTGAATCAACTTGTTTTGTTTATTTCTATGTTCACATCTTTGATTGATTTCAGGAGAGATAGAACGAATGGTTGTGATGAGACCGTGTATGTTCCTACAATTTGTCCTAAAGATGACTGCAAGGTTTTTCTGTCTAAGCGCTGCACAAGGTACCCTTCCTTCCATGGGGTTGTGGAGCTCGTGAAATGA 1566 0.4221 MSNTNLIKFILSITTSFSLTQLIPYLICFLIYLLFLEQISYLTKKRLIPGPSFVLPIIGNAIPLVRDTTKFWEHQSILAKSTSLGFSVNYILGNFIVFIRDTELSRKVFINAKPNAFQPMAHPFGKKIFGEHNLHYMLGEEHKNLRRRIAPNFTLKALSTYTSLQQIIILKHLKSWVEKAHGDSIPLRVLARDMNLETSQTVFVGPYLGLKAREIFERDYFLINIGLTKLPIDFPGTAFCNARIACKHLAETLANCTTMSKEKMEKGEEPLCLIDFWMQDTIRENEESKVNGVMVPPFASDAEIGGYLFDFLFAAQDASTSSLLWAVVLLDSHPKVLAKVREEVARVWSPESNTLITSEQLTKLKYTQAVAREVVRYRPPATVVPHIATEKFPLTESYSIPKGTIVFPSVFESSFQGFTKPDRFDPERFSEGRKEDQIFKRNFLAFGVGPHQCVGQRYALNQLVLFISMFTSLIDFRRDRTNGCDETVYVPTICPKDDCKVFLSKRCTRYPSFHGVVELVK 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01016 521 PANTHER CYTOCHROME P450 26 45 471 - -
Trre11g01016 521 Pfam Cytochrome P450 49 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01016 521 CDD CYP61_CYP710 85 499 - -
Trre11g01016 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Trre11g01016 521 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01016 521 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01016 521 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01016 521 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01016 521 FunFam Cytochrome P450 61 38 506 - -
Trre11g01016 521 Gene3D Cytochrome P450 40 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01016 521 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01016 521 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01016 521 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01016 521 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01016 521 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01016 521 SUPERFAMILY Cytochrome P450 41 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01016 Trre-Chr11 9281711 9283276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01016 19 513 Cytochrome P450 AT2G34500 64.588 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01016 K09832 - gmx:100808148 778.859