Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g01015 ATGAATACTACTAATCTCATCCAATGCATATTATCAATAACAACATCTTTTTCTCTAATCCAATTAATTCCATACCTATTATGCTTTCTCCTTTACATTATTTTTCTTGAACAAATCTCATACCTCTCCAAAAAAAGGTTCATTCCAGGCCCATCTTTTGTTCTTCCTGTCATAGGCAATGCAATCTCATTGGTCCGTGACCCAACTAAATTTTGGGACCTTCACTCCACTCTAGCCAAATCAACCCCTATGGGCTTTTCGGTTGACTACATATTAGGCAATTTCATAGTTTTCATTAGAGACACAGAACTCTCCCGTAAGGTTTTCACCAATGTTAAGCCCAACGCTTTTCAACCCTTGGGCCACCCATTTGGTAAAAAGCTCTTTGGAGAGCATAATCTTATTTACATGGTCGGCGAAGATCACAAGATTCTCCGTCGTCGAATTGCACCCAACTTCACTCCCAAGGCGCTTTCCACCTACACCTCACTGCAGCAAATTATTATTCTCAAACACCTTAAGTCATGGGTTGAGAATAGCCAAACATGTGACTCTATTCCAATCCGTGTATTGGCGCGTGATATGAATTTAGAAACCTCTCAAACTGTTTTCGTGGGGCCCTATTTGAGCCTAAAAGCCCGAGAGATATTTGACCGTGATTACTTTATCTTCAACTTTGGCCTAACGAAGCTCCCATTTGACTTTCCTGGAACTGCATTTCGTAATGCAAAACTCGCCTGTGGTCGTCTCGCAAAAACCTTAGGTAATTGCACGACGATGAGTAGGGAGAAGATGGAGAATGGCGAAGATCCTTCGTGTCTCATTGATTTCTGGATGCAGGATACAATAAGGGAGATTGAGGAATTGAAGGTTAATGGAGTAACGGCGCCGCCGTTTTCTACCGACGTTGAGATCGGAGGTTATCTCTTTGATTTCCTCTTTGCGGCCCAAGATGCATCCACGTCATCACTGTTATGGGCAGTGGCATTGTTAGATTCGCATCCGGAGGTTCTTGCCAAAGTAAGGGAGGAAGTCGCTGGAATCTGGTCGCCAGAGTCAGACACATTGATAACTTCAGAGCAACTAACAGAAATGAAGTACACGCAAGCGGTTGCGCGTGAGGTTGTTAGGTATAGACCACCCGCAACTCTTGTACCGCATATTGCGACAGAGAAGTTTCCAATAACGGAATCATACTCAATTCCGAAAGGAACAATTGTTTTTCCTTCGGTGTTCGAGTCATCATTTCAAGGTTTTACTGAACCAGATCGGTTCGATCCAGACCGATTTTCAAAAGGAAGAAAAGAGGATCAAATATTTAAAAGAAACTTCCTAGCATTTGGAGTTGGACCCCACCAATGTGTGGGCCAGAGGTACGCTTTGAATCAACTTGTTCTATTTATTTCTATGTTCACATCTTTGATTGATTTCAAGAGAGATAGAACAGATGGTTGTGATGAGACCATGTATGTTCCTACAATTTGCCCTAAAGATGACTGCAAGGTTTTTCTGTCTAAGCGTTGCACAAGGTACCCTTCCTTTTCCAGGGTTGAGGAGCTTGTGAAATGA 1569 0.4251 MNTTNLIQCILSITTSFSLIQLIPYLLCFLLYIIFLEQISYLSKKRFIPGPSFVLPVIGNAISLVRDPTKFWDLHSTLAKSTPMGFSVDYILGNFIVFIRDTELSRKVFTNVKPNAFQPLGHPFGKKLFGEHNLIYMVGEDHKILRRRIAPNFTPKALSTYTSLQQIIILKHLKSWVENSQTCDSIPIRVLARDMNLETSQTVFVGPYLSLKAREIFDRDYFIFNFGLTKLPFDFPGTAFRNAKLACGRLAKTLGNCTTMSREKMENGEDPSCLIDFWMQDTIREIEELKVNGVTAPPFSTDVEIGGYLFDFLFAAQDASTSSLLWAVALLDSHPEVLAKVREEVAGIWSPESDTLITSEQLTEMKYTQAVAREVVRYRPPATLVPHIATEKFPITESYSIPKGTIVFPSVFESSFQGFTEPDRFDPDRFSKGRKEDQIFKRNFLAFGVGPHQCVGQRYALNQLVLFISMFTSLIDFKRDRTDGCDETMYVPTICPKDDCKVFLSKRCTRYPSFSRVEELVK 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g01015 522 FunFam Cytochrome P450 61 38 507 - -
Trre11g01015 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Trre11g01015 522 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01015 522 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01015 522 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01015 522 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01015 522 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01015 522 SUPERFAMILY Cytochrome P450 41 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01015 522 CDD CYP61_CYP710 85 500 - -
Trre11g01015 522 Pfam Cytochrome P450 49 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01015 522 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01015 522 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01015 522 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01015 522 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g01015 522 PANTHER CYTOCHROME P450 26 48 472 - -
Trre11g01015 522 Gene3D Cytochrome P450 40 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g01015 Trre-Chr11 9273384 9274952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g01015 22 515 Cytochrome P450 AT2G34500 65.726 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g01015 K09832 - gmx:100808148 816.994