Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00994 ATGGCATCACTCAACCAAGCCAAATTTGACCTTGAACAACAACAATCATCAACAACTAATCTAGAAGTCGAAACAAAAGATTTCGACTACTCGAAAAGATCACAATGGCTAAGAGCAGCTGTTTTAGGAGCTAACGATGGATTAGTCTCTACAGCTTCGCTAATGATGGGAGTTGGTGCGGTCAAGCAAGACATCAAAGCGATGATCTTAACCGGTTTTGCCGGTTTGGTAGCCGGTGCTTGTAGCATGGCGATCGGAGAATTTGTCTCGGTTTATTCTCAATTAGACATTGAAGTTGCTCAAATGAAAAGAGAGAAAGAAAGAGGTAGACAAATTGATGATGATGATGAAGAGAAGGAGACTTTGCCTAATCCTTTACAAGCTGCAGCTGCTTCAGCTTTAGCTTTTTCTATTGGTGCAATGGTGCCATTGCTTGCAGCTTTTTTTATAAGTGATTATAAGGTGAGACTTGGTGTTGTTGTAGCTGCGGTTAGTTTTGCTTTGGTTGTTTTTGGTTGGTTTGGGGCTGTGTTGGGTAAGGCTCCAATTTTTAGGTCTGTTTTGAGGGTTTTGGTTGGTGGTTGGGTGGCTATGTCCATAACTTTTGGGCTCACTAAGTTGATCGGCTCAAGCGGACTTTAG 642 0.4221 MASLNQAKFDLEQQQSSTTNLEVETKDFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKREKERGRQIDDDDEEKETLPNPLQAAAASALAFSIGAMVPLLAAFFISDYKVRLGVVVAAVSFALVVFGWFGAVLGKAPIFRSVLRVLVGGWVAMSITFGLTKLIGSSGL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00994 213 CDD Nodulin-21 35 182 - -
Trre11g00994 213 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 12 208 IPR008217 GO:0005384|GO:0030026
Trre11g00994 213 Pfam VIT family 37 118 IPR008217 GO:0005384|GO:0030026
Trre11g00994 213 Pfam VIT family 119 205 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00994 Trre-Chr11 9049486 9050127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00994 5 213 Nodulin-like Gene Family AT3G43660 67.943 2.66e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00994 K22736 - gmx:100815165 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre11g00994 11 9049486 9050127 Trre1g05271 1 58637509 58638174 PCT