Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00991 ATGGACTCAAAATTCATCGGAAAACCACCGCCGGTAATAATCGACTTAGAAAACATGCCGGAGCGTGGCTCCCACCACCGTAGATCACACTCCGACACTACCTTCCGTTTCGCCGCCAACTTTGACGACCTTCTCCTCTTTGACCCATCCGACTTCGACATCTCCAATCTTCCACTTCCATCTCCCGTCTCCGACGCCGTTCCGATGACCGTTGATTCAGACGAGTCAAACGGGAAGTCTACTTCGGCGGCGCATCATTTACGGAGTTTGTCTGTTGATTCTGAGTTTTTTGATGGATTAGGGTTTGGTGGTGGCGGTGGTGGTGAGAAAATTGAAGAAAGAAAGGTGAATCGTCATAGGCATAGTAATTCGATGGATGGTTCTTCAACGACGTCGTTTGATGTTGAAGAGAATTCTATGGTGATGATTGATGGTGTGAAGAAATCTATGCCTCCTGAGAAACTTGCTGAACTTGCTCTTATTGATCCTAAAAGAGCTAAAAGGATTCTTGCTAATAGGCAATCTGCTGCTCGATCGAAGGAGAGGAAAACTCGATATACAAGTGAGCTGGAGAGGAAGGTGCAGACGCTTCAAACCGAAGCAACTAACCTCTCTGCACAACTTACCATTCTTCAGAGAGATACCAATGATTTGACTTCTCAGAATAAGGAGCTGAAGATGAAGTTAGAGGCTTTTGAGCAACAAGCACAACTTAGAGAAGATCTCAACGAAGCATTGAAGAAAGAACTGCAACGCCTTAGGGCGCAAAAGAATCATTTGACTGCCATCGCCGGTAATCCTTCTTTCAATGGGATGTTCTCGCAATTTGCTACACAACTAACCATGCAACAGATGAGTAATAATCCTCAATCCCAGCAGACACAACCCGGCATGCCGCCTTCTCGTTCTGATCAACATTTCAACGGCCGTGGCCGCCCTAACTTCATGGACTTCAATCACCAGAAGTAG 969 0.4613 MDSKFIGKPPPVIIDLENMPERGSHHRRSHSDTTFRFAANFDDLLLFDPSDFDISNLPLPSPVSDAVPMTVDSDESNGKSTSAAHHLRSLSVDSEFFDGLGFGGGGGGEKIEERKVNRHRHSNSMDGSSTTSFDVEENSMVMIDGVKKSMPPEKLAELALIDPKRAKRILANRQSAARSKERKTRYTSELERKVQTLQTEATNLSAQLTILQRDTNDLTSQNKELKMKLEAFEQQAQLREDLNEALKKELQRLRAQKNHLTAIAGNPSFNGMFSQFATQLTMQQMSNNPQSQQTQPGMPPSRSDQHFNGRGRPNFMDFNHQK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00991 322 Gene3D - 163 217 - -
Trre11g00991 322 Pfam bZIP transcription factor 164 223 IPR004827 GO:0003700|GO:0006355
Trre11g00991 322 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 19 297 - -
Trre11g00991 322 Coils Coil 187 263 - -
Trre11g00991 322 MobiDBLite consensus disorder prediction 284 302 - -
Trre11g00991 322 FunFam probable transcription factor PosF21 163 216 - -
Trre11g00991 322 CDD bZIP_plant_RF2 165 214 IPR044759 GO:0003700|GO:0006355
Trre11g00991 322 SMART brlzneu 160 224 IPR004827 GO:0003700|GO:0006355
Trre11g00991 322 SUPERFAMILY Leucine zipper domain 164 220 IPR046347 GO:0003700|GO:0006355
Trre11g00991 322 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 162 225 IPR004827 GO:0003700|GO:0006355
Trre11g00991 322 MobiDBLite consensus disorder prediction 284 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00991 Trre-Chr11 8985712 8990220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00991 12 311 bZIP Transcription Factor Family AT1G43700 47.917 2.57e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre11g00991 bZIP_1 1.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00991 K20557 - gmx:778142 400.979