Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00990 ATGGAAGGTATCCCTGGTAGTTTAGGTTGGCCTATTATTGGTGAGAGTTTGAAATTCCTCTCTGATTTTTCAAGTCCATCTGGAATTTTTAGCTTCATGAACAAGAGACAAAAGAGATATGGAAAGGTTTTCAAGAGCTTTGTCTTAGGGAGATTCACAGTCTTCATGACTGGAAGAGAAGCAAGTAAGATACTATTAACCGGCAAAGATGGGATTGTGAGTTTGAACTTATTTTACACTGGTCAACAAGTTCTGGGCCCCACCAGCTTGCTACAACAAACTGGAGAAGCACACAAAAGACTTAGAAGATTAATTGCTGAACCTTTGTCATTAGATGGTCTAAAAAAATATTTCCATTTTATTAATACTCAAGCAATGGTAACATTAGATCAATGGGATGGAAAGAAAGTTTTTGTTCTTGATGAGGCTTCTACATTTACACTTAAAGTGATTGGACACATGATCATGAGCTTAGAGCCAACCGGAGAGGATCAAGAAAAGTTTAGGTCAAATTTCAAGATAATTTCTTCCTCGTTTGCTTCATTGCCTTTTAAGCTTCCGGGAACAGCTTTTCAGCGTGGTATCAAGGCTCGCGATAGGATGTACGAAATGTTGGATTCTGTAATATCTAGGAGGAGAAATGGCGAAGATTTCCAACAAGATTTCTTAGAGTCCTTAATTATGAAACATAGCAGAAAATCAGATACACAAGAAGATGAAAATAAACTTACTGATAAGCAATTAAAAGACAATGTATTAACTCTGCTTGTTGCAGGACATGATACAACAACTGCTGCTCTTACATGGCTTATCAAATTTCTTGAAGAAAATCAAAATGTTCTTGAACAATTGCGAGAGGAACATAGAGAAATTATTGCAAACAGAAAAAGTGGAACAGATCTTACATGGTCTGAGGTTAATAACATGCCTTACACAGCCAAAGTGATAAGTGAAACACTTAGAAGAGCCACAATACTACCTTGGTTTTCAAGGAAAGCAGCCCAAGATTTTGAAATTGATGGATACAAAATTAAGAAAGGTTGGTCAGTGAACTTAGATGTTGTTTCAATACACCATGACCCTAAAGTATTCCCAGATCCTCAGAAGTTTGATCCATCTAGATTTGATGAACACTTGAGGCCTTTCAGCTTTCTTGGATTTGGTAGTGGACCACGTATGTGTCCTGGAATGAACCTTGCCAAGGTTGAAATTTGTGTCTTCATTCATCATCTTGTCACAAGATACAAATGGAAAGCTCTAGAGAAAGATGACTCTGTCCAACCAACACTAGTGAGGATGCCAAAGAACAAATTTCCAATTATAGTTGAGTCACTCTAA 1338 0.3722 MEGIPGSLGWPIIGESLKFLSDFSSPSGIFSFMNKRQKRYGKVFKSFVLGRFTVFMTGREASKILLTGKDGIVSLNLFYTGQQVLGPTSLLQQTGEAHKRLRRLIAEPLSLDGLKKYFHFINTQAMVTLDQWDGKKVFVLDEASTFTLKVIGHMIMSLEPTGEDQEKFRSNFKIISSSFASLPFKLPGTAFQRGIKARDRMYEMLDSVISRRRNGEDFQQDFLESLIMKHSRKSDTQEDENKLTDKQLKDNVLTLLVAGHDTTTAALTWLIKFLEENQNVLEQLREEHREIIANRKSGTDLTWSEVNNMPYTAKVISETLRRATILPWFSRKAAQDFEIDGYKIKKGWSVNLDVVSIHHDPKVFPDPQKFDPSRFDEHLRPFSFLGFGSGPRMCPGMNLAKVEICVFIHHLVTRYKWKALEKDDSVQPTLVRMPKNKFPIIVESL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00990 445 Coils Coil 271 294 - -
Trre11g00990 445 Pfam Cytochrome P450 5 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 PRINTS E-class P450 group I signature 353 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 PRINTS E-class P450 group I signature 394 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 PRINTS E-class P450 group I signature 37 56 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 PRINTS E-class P450 group I signature 384 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 PRINTS E-class P450 group I signature 313 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 PRINTS E-class P450 group I signature 247 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 PRINTS E-class P450 group I signature 267 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 CDD CYP90-like 36 443 - -
Trre11g00990 445 Gene3D Cytochrome P450 1 445 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 FunFam Cytochrome P450 family 722 subfamily A polypeptide 1 1 445 - -
Trre11g00990 445 PANTHER CYTOCHROME P450 26 5 425 - -
Trre11g00990 445 SUPERFAMILY Cytochrome P450 3 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 PRINTS P450 superfamily signature 258 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 PRINTS P450 superfamily signature 314 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 PRINTS P450 superfamily signature 385 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre11g00990 445 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 387 396 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00990 Trre-Chr11 8979062 8983950 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00990 5 425 Cytochrome P450 AT5G45340 36.706 8.59e-97 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00990 - - gmx:100803766 814.683