Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00976 ATGCAGAGAATGCAAACTGCTGCTAAAGGTAGGTCTTATGAAGTTTTGATTAAGATTCTTCAAAATGAAGGGGTTTTGGGTTTATATAGAGGCTATTCAGCTACATTGTTGAGAAATTTAGCTGCTGGTGTTTTAAGTTATTTGTCGTTCGAGTATTTGAAGTTAGCGGTTAGGAAGAGTTTGAAGAAGAATCATTTGAAACTGATTCAGAGTGTGATTTGTGGGCAGTTGGCAGGGGTGATTTTGGCGTTGGCGTTGATTATGACGCTGTTGGATGTAGTGAAAACGAGGTTGATGAAGCAGGTGTCTAATGAGGCAGTTGGGACTTGGGAAGGTTGCGGCGGTTATGTATGGTGCAGTTATGGGTACGATTGGGGGGATTTTGAAGGAAGAGGGGTGGGTTGGTTTTACACGTGGAATGGGTCCTAG 429 0.4289 MQRMQTAAKGRSYEVLIKILQNEGVLGLYRGYSATLLRNLAAGVLSYLSFEYLKLAVRKSLKKNHLKLIQSVICGQLAGVILALALIMTLLDVVKTRLMKQVSNEAVGTWEGCGGYVWCSYGYDWGDFEGRGVGWFYTWNGS 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00976 142 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 56 IPR018108 -
Trre11g00976 142 Pfam Mitochondrial carrier protein 3 59 IPR018108 -
Trre11g00976 142 SUPERFAMILY Mitochondrial carrier 2 110 IPR023395 -
Trre11g00976 142 Gene3D Mitochondrial carrier domain 1 137 IPR023395 -
Trre11g00976 142 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 2 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00976 Trre-Chr11 8765986 8766414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00976 19 112 Antiporters AT1G79900 34.737 5.05e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00976 K15111 - pvy:116143373 133.265