Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00964 ATGACAAGGCTGACTGCCCGGGTTCAAAAAGTCAGAGATGAGCTTGAACAGTTGCTGGATGACGATGATGACATGGCCGACCTATATTTGTCGAGAAAGGCAGGTTCAGCATCACCAGTTAGTGGATCAGGTGCTGCAAATTGGTTCGCTGGCTCCCCAACCATAGGATCAAAGATATCCAGAGCAAGCATTGCAACAGTTCGTTTAGATGAAAATGACGTGGAAGAGCTTGAAATGTTGCTTGAGGCTTATTTCATGCAAATTGATGGCACATTAAACAAATTAACCACCCTACTAGAATATATTGACAATACTGAAGATTACATTAACATTCAAGTAAGTGTAGTCATAGTACCAGGAATGTATATCACGGAGCATGTGGATTAG 387 0.4186 MTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSASPVSGSGAANWFAGSPTIGSKISRASIATVRLDENDVEELEMLLEAYFMQIDGTLNKLTTLLEYIDNTEDYINIQVSVVIVPGMYITEHVD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00964 128 Coils Coil 1 21 - -
Trre11g00964 128 Gene3D Magnesium transport protein CorA, transmembrane region 1 115 - -
Trre11g00964 128 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 113 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00964 Trre-Chr11 8449959 8451736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00964 1 113 MRS2 Gene Family AT5G09690 75.424 1.79e-47 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00964 K16075 - gmx:100786817 175.637