Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00920 ATGGAGGCTTCATCTCCTACCAAGAAAAAAAACCATGATAAGGGTTCCTCCCTTGAATTAGATAATGGCCAGCCCGCCCCCAGCCCAATCGGCAAAATGATCGCCGTGGCGTCCATCGCTGCTGGTGTTCAATTCGGATGGGCTCTTCAGCTTTCTCTCTTGACCCCATATGTGCAGACTCTGGGAGTTCCGCACATATGGGCATCTTTCATTTGGCTATGTGGACCAATTTCTGGACTTCTTGTCCAGCCTATATGCGGTTATTATAGTGATCGCAGCACTTGTCGGTTTGGTCGCCGTCGTCCTTTCATCTTTTTTGGATCTCTCGCTGTCGCTATTTCTGTTTTCCTCATTGGATATGCTGCTGATCTCGGTCATTCATTGGGCGATGATCTTACCAAAAAAACTAGACCACGAGCTGTTGCTTTCTTCGTCGTAGGATTCTGGATTCTTGATGTAGCAAACAACATGCTCCAGGGACCGTGTCGCGCTTTCCTCGCTGACCTTGCTGCGGGCGATGAGAAAAAGACAAGAACAGCTATGGGCTTTTTCTCTTTCTTCATGGCCCTCGGTAACATCCTTGGATACGCCGCGGGTTCCTACAGCAAACTCCATAATTGGTTCCCTTTCACTGAAACTGAAGCATGTAACGTCTTCTGTGCGAATCTTAAGAGTTGCTTCTTTTTCTCCATTATTCTCTTGTCAGTCCTCGCTGGTATCGCCCTCGTTGTCGTTGAGGACAAACCAATGGAGAAACAAATGGTGAGTGATGACGACATGCAAGTTTCTTGCTTCGGAGAAATGTTCGGTGCATTGAGGGAGTTGAAGAGGCCAATGTGGATATTGATGTTGGTGACCTGCGTGAACTGGATCGCGTGGTTCCCATTCTTCTTGTTCGATACCGACTGGGTGGGTCATGAGGTGTACGGAGGAGTTGCAGGAGAGCCAGCATATGACAATGGTGTGAGAGCTGGTTCTTTGGGACTTATGCTTAATGCTATTGTTCTTGCTTTCATGTCTTTGGCTGTAGAGCCATTGGGAAAAATGGTTGGAGGAATCAAAAGACTTTGGGGTATAGTTAACTTCATTCTTGCTATCGGCTTGGCAATGACTGTCGTCATTACCAAGATTGCAGAGCAAGAACGTCAGGCTAGTGGTGGTGCCACCATTGGAAATCCTTCCGAAGGTGTCAAGATCAGTGCCATGCTCTTTTTCGCGGTTCTTGGTATCCCTATGGCGATTACTTTCAGTGTTCCTTTTGCTCTAGCATCAATTTATTGCAGCGCTTCAGGTGCAGGACAAGGTTTATCGTTAGGAGTCTTGAATCTTGCAATTGTGGTACCACAGATGTTTGTGTCAACACTAAGTGGACCTTGGGATGCTCTATTTGGTGGTGGTAATTTGCCGGCATTCGTCGTTGGTGCGGTGGCTGCCGTCATCAGTGCCATATTGGCGATGGTTATGTTGCCCTCGGTTAAACCGGATGATGAAGCCAAGGTTAAACTTGGAGGAAGTTTCCATTGA 1524 0.4738 MEASSPTKKKNHDKGSSLELDNGQPAPSPIGKMIAVASIAAGVQFGWALQLSLLTPYVQTLGVPHIWASFIWLCGPISGLLVQPICGYYSDRSTCRFGRRRPFIFFGSLAVAISVFLIGYAADLGHSLGDDLTKKTRPRAVAFFVVGFWILDVANNMLQGPCRAFLADLAAGDEKKTRTAMGFFSFFMALGNILGYAAGSYSKLHNWFPFTETEACNVFCANLKSCFFFSIILLSVLAGIALVVVEDKPMEKQMVSDDDMQVSCFGEMFGALRELKRPMWILMLVTCVNWIAWFPFFLFDTDWVGHEVYGGVAGEPAYDNGVRAGSLGLMLNAIVLAFMSLAVEPLGKMVGGIKRLWGIVNFILAIGLAMTVVITKIAEQERQASGGATIGNPSEGVKISAMLFFAVLGIPMAITFSVPFALASIYCSASGAGQGLSLGVLNLAIVVPQMFVSTLSGPWDALFGGGNLPAFVVGAVAAVISAILAMVMLPSVKPDDEAKVKLGGSFH 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00920 507 SUPERFAMILY MFS general substrate transporter 33 494 IPR036259 -
Trre11g00920 507 CDD MFS_SLC45_SUC 33 485 - -
Trre11g00920 507 MobiDBLite consensus disorder prediction 1 17 - -
Trre11g00920 507 NCBIfam sucrose/proton symporter 29 494 IPR005989 GO:0005886|GO:0008515|GO:0015770
Trre11g00920 507 FunFam Sucrose transporter SUC2 31 252 - -
Trre11g00920 507 Pfam MFS/sugar transport protein 37 292 - -
Trre11g00920 507 Gene3D MFS general substrate transporter like domains 31 490 IPR036259 -
Trre11g00920 507 MobiDBLite consensus disorder prediction 1 25 - -
Trre11g00920 507 PANTHER SUGAR TRANSPORTER 31 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00920 Trre-Chr11 7764027 7766069 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00920 9 507 Sucrose Transporter Gene Family AT1G22710 63.654 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00920 K15378 - gmx:100784153 736.873