Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00899 ATGTCGCTGGAACCGTTGGATCGAAAGAGCTCGTTTAGGGAGAGGAAGCGCCACGAGAGTTCTGAGTCTTTTGGGTCTGTGGCTAGATGGAGAGGATCTACTTCTTATAACCGGTCGCGTGAGTTCAATCGTGGTGGCGATTATCGAAGACTAGGAGGTCATCGTAAGCAGGGTAGCTGGCAGCTATTTCCAGAAGAATCTGGTCAACGGCACATGATTTCTCGATCTTGTGACAGGAGGCTGGAGGAAGATAACTATCGCCCGTCATTTTCTCGAGGGGATGGAAAGTATGGAAGGGGCAATAAGGAAAGTAGAGGAGCCTTTAGCCAGAGAGAATGGAGAGGGCGTTCATCAGAAACCACAAACAACTCTCTGAATATGTCCAGGAGGCAAACCAATGCAAGTAATGATCGCAAGTCAGTTGATGATATGCTAACATATTCCTCTCATTCACATTCTGACTTAGTAAATACTTGGGAGCAGCATAACATGAAAGACCAGCATGATAAGATCGGTGGTGTTAATCGGTTTGTTACAGACCAGAGAAATGATAGGGATAGTTCATTGGGTACAATTGACTGGAAGCCCCTTAAATGGACCCGGCCTGGATGCTCCTCTTCACGAGACTCAGGCTTTAGCCGCTCAAGTGGCATGAGGAGCTTAGGAGGGACAAATTCGATGGGAAGCTGTGAATGGAAGGTTGGGTTGCAACAAAAATTTGCCACTGCTGTTGAGTCAAATTCAGGGGAAGCTGCTACATGTCGTGCATTATCTGCTCCATCCGAAGAGGAAAATTCGAGGAAGAAGCCTAGGCTAAAATGGGGTGAGGGACTTGCAAAGTTTGAGAGAAAGCAAGTTGACGGGCCTGAGGTAACTTCAAACAATGATGACCCTGTCTCACCTCCTTTCAATATGGAACCCAATAATTTCCTCAGTACTGGCTTAGTAGATAGAAGCCCTAAAGTTTCAGGACTCCCAGGGTGTGCATCTCCTGCAACTCCATCTTCGGCTGCCCGCAGCTCTTCACCAGGTGCAGATGATAAATTGTTTGAAAAAGCTGCAAATGTGGACAATGATGTTGGTAACTTGAGTAGTTCACCTGGTCCTGGGTCTCAAAGTCATCTGCAGATACTTTCTTTCGATTTAGAGAAGGTGGATATTGACTCATTGATTAGTTTGGGCTCTTCACTTGTCGAGTTGTTACCACAGTCTGATAATCTAAGCTCTGTGGATTATAGTTTATTAATTTCCACCACAATGAATAAGCTGCTGATATTGAAAGCGGACATTTCAAAGGTATTAGAGGTCACTGAAACTGAAATTGATTTACTTGAAAATGAACTTAGATCTCTAAAATCTGAATCTAAGGATAGATTTCAATGTTCAGAAGCAGTTGGCTCTCTGCTAATTCCATGTGCTTATAGGCATGTTGCCAATGTCTCGGCTTGTGGTGATAGTAATTCATCTTTGGAGGTTAAAGATGGTGTGGATGCTAAGTCTAGTGCGAGCACTGGGGATATTTTATGCGATACAATTATTTCTTGCAATGAAAAAACTGCAAAAGCAGCATGTGAAGTGTTTGATAAATTATTGCCTGAAAAATGTTGCAAGAACGAGAATATTGGAGCTAGCAGTGGTTCATGCTCTCATAATGGCACACTCATTAAGGAAAAATTTGCCGAGAGAAGGCGATTGGCAAGATTGAAGGAGAAAATTATAACACTCAAGTTTAAAGCCTTGCATCACTTGTGGAAAGAAGACATGCGTTTAGTGTCTATTAGGAAACACCGCCCAAAATCTCACAAGAAACTTGAATCAGAGCTACGCACCACCAGTAATAGTCATCAGAAGAAGCGGTCTTCTATTCCTTTCCGTTTTCCCTTCCCTGCAGGAAACCAACTGAAATTGGTTCCAACATCTGAGATGATCAAGTATACAAGCCAACTGCTTTCAGAATCCAAACATGAAATTCACAGAAGCACCTTGAAGATGCCAGCATTAATTTTGGATCAAAAGGACAAAATGTATACAATGTTTTTATCTAGCAATGGGCTGGTTGAAGATCCAGTGGCTATTGAGAAAGAAAGGGTCATGATAAACCCTTGGACTGCAGAAGAGAAAGAGATTTTCTTGGAGAAATTTGCTGCCTATGGAAAAGATTTTCGGAAGATTGCTACTTTCCTTGACCACAAGACAACGGCTGACTGCGTTGAATTCTACTACAAAAATCACAAGTCTGATTGTTTTGAGAAAATTAAGAAAAAAGATGATGACAAGCTAGGGAAATTTTTCAAAGCCAAAACTGACTTGATAGCATCAGGTGTAAAATGTAACTCTGAAGTGAATGCTTCTTCACTTGATATTTTGAGTGAAGCTTCTTCAGTGATGGCAGATGACATTGCACGTGATCGTAAAATGCGTTCAGGAAGTTCCTTATGGAGGGGATATAATAGTAAGGCCATGTCAAGGTGTGACAATATCATTACAGAGAGGTCGAACAGTTTTGACATTCTTCAAGATGAAAGAGAGACTGTTGCAGCTGATGTATTGGCTAGTATATGTGGTTGTCTTTTATCTGAGGCAACGAGTTCCTGCATAACTAGTTCAGTTGATCCCGTGAAAGGTAAAAGGGTCGTCAAGAAGTGCGTGAAAGCGAAGCCTCTATCCAAAAAACCTCCGATGCCAGACATTACTCAAAATATTGATCATGAAACTTGTTCCGACGAGAGCTGTGGTGAAATGGAACTTACTGATTGGTCAGATGTAGAGAAGGCAGCCTTTCTTCATGCTGTATCATTGTTTGGTAAGGATTTTGCAATGATTGCACAGCGTGTCAGAACAAGATCCCAATACCAGTGCAAAGTGTTTTTTAGCAAGACTCAGAAACGTCTTAGATTGAATCGCATGGGTCAGCGATCTGAAAATGTTGGATCACTGGTGAATGATGGTGTGGATGGTGCCAGGAGTGATGCAGATAATGCATGCGTTGTAGAGACAGGTTCAGCCAATGGCTCTGATTCGTCAGGCACTAAAACAGGTGTGGACCAGCCTGCATCTGATAAGAACATGTATCATGATGAATCCAATCCCGTAGAAGCTAGCAACCTGTCAGCTGACTTGTATACATCCGAGGAAATTAATAGGAAGGTAGATCATGAAGATGTAAATATGGTTTCTAATGCATGTGTGATTGGTAGCGAGTTTAAACTGTGCACTGACGGTAATGTAGGTGTCTTGAATGGTTCTGATAGGTCTGATTCTGTCCGGGAGCAGAGAGCTATAGTTATGTCAGATAGCATAGAAATTGGAAAAAGTGAACCCAGTGGAGGTGCAGTTACAGAATTGGTGTCTGGTACGGGGACAATGGAACCATGCTGCTCTAATTCTGTTGCTGAGGTTAGACTAGTCTCTGGCGTTTCTTCTGCACAATGTGGAGATGAATTGGAGGGTTCAACTACATGTCTAGTTGATGGAGATGAAGCTGATACAGATGTTGTAATTGAATTGAAAGGCAATGTCCACGATTCAAGCACTTTGGTGAATACTTCACTATCATCTGTGGATGTTTCTTGTCAAAGATTGAGTGTTGAAGCTGAAAATGAGCCCCAACTATGCCTTGAAAAACCTCAATTCTCAGGATCATCAGAGGGCCCACTCTCAAATGCAACATCAGCATTGCAATATTCTGGTGCTGCTGTGCAATACAAGAAAACATCTAGCCAAGATCTACCGTCTTGTGATTTTCAGGGAAACCAAGATATGACTCGACACAATTGCAGTAGCAATCTTGGCCATCAGCCTTGTACTTCTGAGAATTCACTGGACCATGTTGAGGCTGCTAGAGTCCTTCAATGCTATAATCTGCAAGCACCTTCTGAGAAGGAAGTGAATGTGAATATGAGCTGCAGCAGTTCAGCAACTGAATTGCCACTTTTGTCCCAGAAGATTGATTTAGAAGAATCACCCAGAAATGATGTGAAAATATTCGGAAAGATACTCACCAATCCTTCATCCACCCTAGGTGCAAAGGAAAATGAAGAAAATGGTACCCATCATCCGAAGTTAAGTAGTGGCTCTTCTAGTCTGAAATTAACCGGCCATGATAATACTGGTGGAAAATCAACTATTTTGAATGTTGATCTTAATGATTGCCGGGTCTTTGAAAATGTTCCTGTTGGGAACAAAATGCAGCCTGTTTTCTCATCACTCCCTGATTCTGCCATTTTGCTTGCCAAGTATCCTGCTGCATTTGGTAGTTATGGTCTTGAAGCAGTCTCAACTTTACAGCAGCAAGTTACAAAATTGGTAACATCAAATGGTATTGGTGAACCAGGGATTCTTGCAGGTGGATCCACCACCATTGCTGACCAGTTTGTTGGTCAAACTGGGAGTGCAATAAAAGAAGATGAACCTGTGGGAGAGAAAAAGGATTTGAATAGTTAG 4443 0.4222 MSLEPLDRKSSFRERKRHESSESFGSVARWRGSTSYNRSREFNRGGDYRRLGGHRKQGSWQLFPEESGQRHMISRSCDRRLEEDNYRPSFSRGDGKYGRGNKESRGAFSQREWRGRSSETTNNSLNMSRRQTNASNDRKSVDDMLTYSSHSHSDLVNTWEQHNMKDQHDKIGGVNRFVTDQRNDRDSSLGTIDWKPLKWTRPGCSSSRDSGFSRSSGMRSLGGTNSMGSCEWKVGLQQKFATAVESNSGEAATCRALSAPSEEENSRKKPRLKWGEGLAKFERKQVDGPEVTSNNDDPVSPPFNMEPNNFLSTGLVDRSPKVSGLPGCASPATPSSAARSSSPGADDKLFEKAANVDNDVGNLSSSPGPGSQSHLQILSFDLEKVDIDSLISLGSSLVELLPQSDNLSSVDYSLLISTTMNKLLILKADISKVLEVTETEIDLLENELRSLKSESKDRFQCSEAVGSLLIPCAYRHVANVSACGDSNSSLEVKDGVDAKSSASTGDILCDTIISCNEKTAKAACEVFDKLLPEKCCKNENIGASSGSCSHNGTLIKEKFAERRRLARLKEKIITLKFKALHHLWKEDMRLVSIRKHRPKSHKKLESELRTTSNSHQKKRSSIPFRFPFPAGNQLKLVPTSEMIKYTSQLLSESKHEIHRSTLKMPALILDQKDKMYTMFLSSNGLVEDPVAIEKERVMINPWTAEEKEIFLEKFAAYGKDFRKIATFLDHKTTADCVEFYYKNHKSDCFEKIKKKDDDKLGKFFKAKTDLIASGVKCNSEVNASSLDILSEASSVMADDIARDRKMRSGSSLWRGYNSKAMSRCDNIITERSNSFDILQDERETVAADVLASICGCLLSEATSSCITSSVDPVKGKRVVKKCVKAKPLSKKPPMPDITQNIDHETCSDESCGEMELTDWSDVEKAAFLHAVSLFGKDFAMIAQRVRTRSQYQCKVFFSKTQKRLRLNRMGQRSENVGSLVNDGVDGARSDADNACVVETGSANGSDSSGTKTGVDQPASDKNMYHDESNPVEASNLSADLYTSEEINRKVDHEDVNMVSNACVIGSEFKLCTDGNVGVLNGSDRSDSVREQRAIVMSDSIEIGKSEPSGGAVTELVSGTGTMEPCCSNSVAEVRLVSGVSSAQCGDELEGSTTCLVDGDEADTDVVIELKGNVHDSSTLVNTSLSSVDVSCQRLSVEAENEPQLCLEKPQFSGSSEGPLSNATSALQYSGAAVQYKKTSSQDLPSCDFQGNQDMTRHNCSSNLGHQPCTSENSLDHVEAARVLQCYNLQAPSEKEVNVNMSCSSSATELPLLSQKIDLEESPRNDVKIFGKILTNPSSTLGAKENEENGTHHPKLSSGSSSLKLTGHDNTGGKSTILNVDLNDCRVFENVPVGNKMQPVFSSLPDSAILLAKYPAAFGSYGLEAVSTLQQQVTKLVTSNGIGEPGILAGGSTTIADQFVGQTGSAIKEDEPVGEKKDLNS 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00899 1480 MobiDBLite consensus disorder prediction 1 138 - -
Trre11g00899 1480 CDD SANT 919 957 IPR001005 -
Trre11g00899 1480 MobiDBLite consensus disorder prediction 1337 1367 - -
Trre11g00899 1480 MobiDBLite consensus disorder prediction 291 316 - -
Trre11g00899 1480 SUPERFAMILY Homeodomain-like 917 965 IPR009057 -
Trre11g00899 1480 MobiDBLite consensus disorder prediction 1 24 - -
Trre11g00899 1480 MobiDBLite consensus disorder prediction 261 290 - -
Trre11g00899 1480 MobiDBLite consensus disorder prediction 71 112 - -
Trre11g00899 1480 SMART sant 698 746 IPR001005 -
Trre11g00899 1480 SMART sant 915 963 IPR001005 -
Trre11g00899 1480 MobiDBLite consensus disorder prediction 26 41 - -
Trre11g00899 1480 Gene3D - 873 975 - -
Trre11g00899 1480 ProSiteProfiles SANT domain profile. 697 748 IPR017884 -
Trre11g00899 1480 ProSiteProfiles SANT domain profile. 914 965 IPR017884 -
Trre11g00899 1480 Pfam Myb-like DNA-binding domain 701 742 IPR001005 -
Trre11g00899 1480 Pfam Myb-like DNA-binding domain 918 958 IPR001005 -
Trre11g00899 1480 SUPERFAMILY Homeodomain-like 685 745 IPR009057 -
Trre11g00899 1480 FunFam Metastasis-associated 1 family, member 3 698 758 - -
Trre11g00899 1480 Gene3D - 678 750 - -
Trre11g00899 1480 MobiDBLite consensus disorder prediction 250 346 - -
Trre11g00899 1480 MobiDBLite consensus disorder prediction 1352 1367 - -
Trre11g00899 1480 MobiDBLite consensus disorder prediction 997 1036 - -
Trre11g00899 1480 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 487 1440 - -
Trre11g00899 1480 Coils Coil 427 454 - -
Trre11g00899 1480 MobiDBLite consensus disorder prediction 113 138 - -
Trre11g00899 1480 MobiDBLite consensus disorder prediction 997 1017 - -
Trre11g00899 1480 MobiDBLite consensus disorder prediction 599 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00899 Trre-Chr11 7562872 7573007 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Trre11g00899 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00899 - - tpra:123910846 2574.66