Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00890 ATGGAGAAGAATCTTGATGAACATTCCAGCCCTCACAAAGATGAGGGAAACAACACTGATGTTGATGATACCTCTAAATCGTTGTTGTCGGAGACCAACGATAATGTCGAAGTCAAATCAGTAGACGGTGAAAAAGAAAAGGTTGACGATGTAGATCTTGTCGAGGGAGAGCCAAAAGAGGAGAAGGAGAATGAGGAAGGTGTAACCATCGAGGTTACACCACCTGAAACTCCTCCTCCTAACTTGGAGAAGGTTCTAGAAGACATTGATCGATTCTTAGCGACTACAAATGAGAATAATAACAACAATGTCAATCCCAACGAAGAAAAGATTATTCCTGAATGTGTTGACAAGTTTTTGGATCTCGTGGAAGAGAAAATTGCGAAATATGATTCTGGTGAAACAAAGTGGGGTGAGATCGTGGAGGAAGATTCATCATTGTTGGAAGGTGTGAATCGCGTTTCGAAGATGATGAAATTGTTGAACACGATGTTCATAGAGTATCAACCTGGAGAAAAAGAAGCAGAAGGAGATGCAGAAAAGGAAAATGAAAAAGAAAATGATGAGAAAAAGGATCAATCAGTATTAGTGAACCGCGTTGGCGCAATTCAACAACGAGCCATGTCGTATTTGGAGGAAGAGTTTCGTATGTTAATGGAAGAATCTAGAAACCAAAACAAAACAGAATCTGGTGGGACCAATGACTCGAAAGGGAAACACGTGGCGGCAACAGAGCAATCAGAAAATGAATCAACAGAGACGGTTATGGATTTTCCGGGTTTTAAGGAGGAGGTAGTTACAAATTTGAATAAGATAGCACGTGAGATGTTATTAGCAGGTTATGATTCAGAGTGCTGCCACATCTACACTGTTTCTAGAAAACACGGTTTCAGTGAAGGTTTATACAAGCTTGGGTACGAAAGGATAAGCATGGATGAGATTCAAAAAATGCAATGGGAATCATTGGAGAGGGAGATTCCATCATGGATCAACACATTCAAGGAATGCGCCACCGTGTGGTTCCCCGGCGAACGGAAGCTTGCTGCATCAATTTTCTCAGATAATCCATCAGTTGCTGAGACACTCTACACCGAACTCACACGTGTGGTGGTGTTTCAACTTCTCAACTTTGCTGAAAGCGTCGCAATGACAAAACGTGCTGCTGAGAAGCTCTTCAAGTATCTCGACATGTATGAGACATTAAGAGAAACCGTTCCGAATCTCGAGAAACTCTACCCGGAGGACATTGTTGATGATATCAAAGCTGAAATGACTTCGGCTAAGAATAGGCTTGGGGAGGCTGCGGTGTTAATATTTTGCGAACTTGAAAACTCGATCAAATCTGACTCTGGAAAAACACCGGTTGCCGGTGGCGCGGTTCATCCCCTAACTCGCTACATAGTGAACTATCTGAGACTTGCATGCGAGTATAAAGACACATTGGAAGAGGTTTTTCGAGAGCACTCGAAAATTGAGCGTGCTGATTCAACAAGCAGGCCACATTACGAAAATGACAATCAACAGTCGAAAGAGAAAGAAAACATATCACCATTTGCGGCACAATTGACACGTGTAATGGAATTACTCGACGCAAATCTCGAAGGAAAAGCAAAACTATACAAAGAAGTACCATTAAGTTGCATCTTTATGATGAACAATGGAAGGTACATTGTTCAAAAAATCAAAGGCTCAGCTGAAATCTACCAAGTGATGGGTGAAACTTGGTGTCGTAAGAGATCAACTGAATTGAGAACTTACCACAAAAACTATCAAGTAGAAACATGGAGTAAGATATTAACTTGTTTAAGTCCAAAAGGTTTAAGCGATAATGGGAAAGTTCCGAAGCCAGTGTTGAAAGAAAGATTCAAGACTTTCAACACATTGTTTGATGAGATACATAAGACACAAAGCACATGGGTTGTGAGTGATGAACAACTTCAATCTGAGCTTAGAGTTTCAATATCTGCACTTGTGATTCCTGCTTATAGATCATTTTTGGGGAGGTTTTCACAGTATTTGGATCCAGGGAGACAAACTGAGAAGTATATTAAGTTTCAAGCTGAGGATATAGAGAATTACATTGATGACTTGTTTGATGGTAATCCTCACACAGGCATGGTCAGGAAGAAAGCATGA 2136 0.4082 MEKNLDEHSSPHKDEGNNTDVDDTSKSLLSETNDNVEVKSVDGEKEKVDDVDLVEGEPKEEKENEEGVTIEVTPPETPPPNLEKVLEDIDRFLATTNENNNNNVNPNEEKIIPECVDKFLDLVEEKIAKYDSGETKWGEIVEEDSSLLEGVNRVSKMMKLLNTMFIEYQPGEKEAEGDAEKENEKENDEKKDQSVLVNRVGAIQQRAMSYLEEEFRMLMEESRNQNKTESGGTNDSKGKHVAATEQSENESTETVMDFPGFKEEVVTNLNKIAREMLLAGYDSECCHIYTVSRKHGFSEGLYKLGYERISMDEIQKMQWESLEREIPSWINTFKECATVWFPGERKLAASIFSDNPSVAETLYTELTRVVVFQLLNFAESVAMTKRAAEKLFKYLDMYETLRETVPNLEKLYPEDIVDDIKAEMTSAKNRLGEAAVLIFCELENSIKSDSGKTPVAGGAVHPLTRYIVNYLRLACEYKDTLEEVFREHSKIERADSTSRPHYENDNQQSKEKENISPFAAQLTRVMELLDANLEGKAKLYKEVPLSCIFMMNNGRYIVQKIKGSAEIYQVMGETWCRKRSTELRTYHKNYQVETWSKILTCLSPKGLSDNGKVPKPVLKERFKTFNTLFDEIHKTQSTWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYIKFQAEDIENYIDDLFDGNPHTGMVRKKA 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00890 711 Gene3D Exocyst complex component Exo70 112 707 - -
Trre11g00890 711 FunFam Exocyst subunit Exo70 family protein 132 706 - -
Trre11g00890 711 MobiDBLite consensus disorder prediction 171 193 - -
Trre11g00890 711 MobiDBLite consensus disorder prediction 1 81 - -
Trre11g00890 711 PANTHER EXOCYST COMPLEX PROTEIN EXO70 118 700 IPR004140 GO:0000145|GO:0006887
Trre11g00890 711 MobiDBLite consensus disorder prediction 495 514 - -
Trre11g00890 711 MobiDBLite consensus disorder prediction 22 36 - -
Trre11g00890 711 MobiDBLite consensus disorder prediction 1 21 - -
Trre11g00890 711 MobiDBLite consensus disorder prediction 37 69 - -
Trre11g00890 711 MobiDBLite consensus disorder prediction 222 254 - -
Trre11g00890 711 MobiDBLite consensus disorder prediction 224 240 - -
Trre11g00890 711 SUPERFAMILY Cullin repeat-like 147 699 IPR016159 -
Trre11g00890 711 Pfam Exo70 exocyst complex subunit 328 696 IPR046364 GO:0000145|GO:0005546|GO:0006887
Trre11g00890 711 MobiDBLite consensus disorder prediction 495 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00890 Trre-Chr11 7478521 7480656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00890 15 701 EXO70 exocyst subunit family AT5G13990 48.611 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00890 K07195 - gmx:100819960 848.58