Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00886 ATGGATCATTCTCTCATCCCAAGCTTCCTCTACTCCTCTACCTCATCGCCGCAAAAGAAGATCGTAGATGATGTTTCCACCATCCATCATACCGCAGTGGAATCTTCGAAATTTATGATTCCTTCTCCCAGCGAGTCTGGAAGAAGGAATATAAAGTTGTTCTCTCGTGATTATTATCTTGCTTGTGCCGTTGGCGGAAGCATATGTTGTGGTTTTACTCACATGGCGGTTACTCCTCTTGATCTTGTCAAATGTAATATGCAGATTGACCCTGCAAAGTATAAGAGCATTTCCTCTGGATTTGGAGTGATGCTTAAGGAACAAGGGTTTAGAGGATTTTTTAGAGGATGGGCACCTACATTTCTTGGTTATAGTGCACAAGGTGCATTCAAATATGGACTCTATGAATATTTCAAGAAGTACTATTCAGATGCTGTTGGTCCAGATTATGCTACAAAGTATAAGACATTAATCTACCTAGCTGGATCAGCATCTTCTGAGGTTATTGCTGATGTTGCACTTTGTCCATTTGAGGCAATTAAGGTTAGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGCCTTTCTGATGGGTTGCCTAAATTGCTTAGATCTGAAGGAGTCTCAGGGTTGTATAAGGGAATTGTGCCTCTTTGGGGAAGACAGGTTCCATATACAATGATGAAGTTTGCTTCTTATGAAAACATTGTTGAGATGATCTACAAGCATGCAATTCCAAAACCAAAAGATGAATGCACCAAAACCCTACAACTTGGTGTGAGTGTTGTTGGTGGATATTTAGCTGGTATATTATGTGCTGTTGTCTCTCATCCTGCAGATAATCTTGTCTCTTTCCTCAACAGTTCTAAAGGAGCAACTGCTGCTGATGCCGTAAAGAAATTGGGATTATGGGGTATGTGTACACGCGGTCTCCCTCTTCGTATTCTTATGGTGGGAACTCTAACTGGAGCTCAATGGGGAATTTATGATGCATTCAAAGTGTCTGTAGGCCTGCCAACAACTGGTGGTGTTACTCCTGCTCCAGCTTCTGCTTCTTAG 1056 0.4186 MDHSLIPSFLYSSTSSPQKKIVDDVSTIHHTAVESSKFMIPSPSESGRRNIKLFSRDYYLACAVGGSICCGFTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVMLKEQGFRGFFRGWAPTFLGYSAQGAFKYGLYEYFKKYYSDAVGPDYATKYKTLIYLAGSASSEVIADVALCPFEAIKVRVQTQPGFARGLSDGLPKLLRSEGVSGLYKGIVPLWGRQVPYTMMKFASYENIVEMIYKHAIPKPKDECTKTLQLGVSVVGGYLAGILCAVVSHPADNLVSFLNSSKGATAADAVKKLGLWGMCTRGLPLRILMVGTLTGAQWGIYDAFKVSVGLPTTGGVTPAPASAS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00886 351 Gene3D Mitochondrial carrier domain 58 333 IPR023395 -
Trre11g00886 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 154 238 IPR018108 -
Trre11g00886 351 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 29 345 IPR044677 GO:0005315|GO:1990547
Trre11g00886 351 Pfam Mitochondrial carrier protein 59 144 IPR018108 -
Trre11g00886 351 Pfam Mitochondrial carrier protein 157 242 IPR018108 -
Trre11g00886 351 SUPERFAMILY Mitochondrial carrier 58 330 IPR023395 -
Trre11g00886 351 FunFam Phosphate carrier protein, mitochondrial 57 335 - -
Trre11g00886 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 57 141 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00886 Trre-Chr11 7434334 7442369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00886 3 351 Chloroplast and Mitochondria Gene Families AT5G14040 68.579 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00886 K15102 - gmx:100804257 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g02062 13 17927836 17931109 Trre11g00886 11 7434334 7442369 PCT