Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00855 ATGGAGATAGAAACAGATTCATTTTCTTCCCCTACCAAGGTTAAAGAAATCGACGGCCACCTCGCGGACGTCGGTTACAAAGTTAAGTCATCTGAGCTACATCAAGTAGCTCAGAACATCGAACGGTTAGAGAACGTAATCGTGAATTCATCGTCAAGCGACATTTCACAATTCGCTTCCGATACCGTTCACTACGATCCCTCCGACATTGGTAATTGGGTAGACAATCTCCTCTCGGAATTCGACCACAATACTTCTTTACCTTATGATTTCTCTGAACTACCAGATCTCGCACAAGATCAGCACCACCACCAATTAAAAGTGGTTTCCACCGTCGAAGAAGACTCTGCAATAAAGCTTGTTCACATGCTGATGACATGTGCGGATTCGTTGCAACGTGGCAACGTACAATTGGCTGGCTCGTTAATCGAAGGCATGCAAGGTTTGTTAGCAAACATGAACACCAACTCCGGCATCGGAAAAGTCGCCGGATACTTCATCGACGCTTTAAACCGTCGCATCTTCGGTCAAAACAATATCATCCATATCGAGAACGATGTTCTTTATCATCACTACTACGAAGCATGTCCATATCTCAAATTCGCTCATTTCACAGCAAATCAAGCTATACTTGAAGCTTTCAACGGTCACGATTGTGTCCACGTCATTGATTTCAACCTCATGCACGGTCTTCAATGGCCGGCGTTAATTCAAGCTCTAGCGCTTCGTCCTGGTGGACCTCCGTTTCTCCGTCTCACCGGCATTGGTCCACCGTCGCATGATGACCGTGACAACCTCCGTGAAATTGGACTCCGTCTCGCCGAATTAGCTCGCTCCGTTAACGTTAGATTCGCTTTTCGTGGTGTCGCGGCGTGGCGGCTTGAAGATGTGAAGCCGTGGATGCTTCAGGTAAGTTCTAAAGAAGCCGTGGCGGTTAATTCTATTATGCAGCTTCATCGTCTTCTTGGATCTGAACCCGACCCGAATAATCCTTCTCCTATTGAAACGGTTTTGGGTTGGATCCGAAGTTTGAACCCGAAAATCATGACGGTTGTGGAACAAGAAGCGAATCATAACCAGGATGGGTTTATGGACCGGTTCACTGAATCATTACATTATTACTCGACCGTTTTTGACTCACTAGAAGCGTGTCCGGTTGAACCGGATAAAGCTATGGCTGAGATTTATTTACAAAGAGAGATTTGCAACGTGGTGTGTTGTGAAGGACCGGCTCGAGTGGAGAGACATGAACCGCTTGTTAAGTGGAGGGAACGGCTTGGGAAAACCGGGTTCAGACCGTTACATTTGGGTTCGAATGCTTTTAAACAAGCTAGTATGTTGTTGACTCTGTTTTCAGCGGAGGGTTATTGCGTTGAAGAGAATCAAGGGAGCTTGACTTTGGGTTGGCATAACCGTCCTCTCATTGCGGCTTCGGCTTGGCAAGCTGTACCTGAAACGCTGCGTTTTGATAATTGA 1476 0.4648 MEIETDSFSSPTKVKEIDGHLADVGYKVKSSELHQVAQNIERLENVIVNSSSSDISQFASDTVHYDPSDIGNWVDNLLSEFDHNTSLPYDFSELPDLAQDQHHHQLKVVSTVEEDSAIKLVHMLMTCADSLQRGNVQLAGSLIEGMQGLLANMNTNSGIGKVAGYFIDALNRRIFGQNNIIHIENDVLYHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPFLRLTGIGPPSHDDRDNLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVSSKEAVAVNSIMQLHRLLGSEPDPNNPSPIETVLGWIRSLNPKIMTVVEQEANHNQDGFMDRFTESLHYYSTVFDSLEACPVEPDKAMAEIYLQREICNVVCCEGPARVERHEPLVKWRERLGKTGFRPLHLGSNAFKQASMLLTLFSAEGYCVEENQGSLTLGWHNRPLIAASAWQAVPETLRFDN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00855 491 Pfam Transcriptional regulator DELLA protein N terminal 18 85 IPR021914 -
Trre11g00855 491 FunFam DELLA protein GAI 16 81 - -
Trre11g00855 491 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 101 477 IPR005202 -
Trre11g00855 491 SMART DELLA_2 18 96 - -
Trre11g00855 491 ProSiteProfiles GRAS family profile. 111 481 IPR005202 -
Trre11g00855 491 Gene3D - 16 81 IPR038088 -
Trre11g00855 491 Coils Coil 26 46 - -
Trre11g00855 491 Pfam GRAS domain family 120 481 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00855 Trre-Chr11 7275202 7276677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00855 17 481 GRAS Transcription Factor Family AT1G14920 48.728 9.13e-163 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre11g00855 GRAS 5.9e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00855 K14494 - gmx:100805968 754.592