Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00770 ATGACAACAGCTTATACAACTTACAAGAACAATCAAACATTATTGGATCATGCAAACAAAAATCCAGCAACTCCATTTGATTTTGGTGCTGGACACGTCGACCCTATTTCCGCACTAAATCCTGGACTTGTCTATGAACTGACAGTGGATGATTATTTGAGCTTCCTCTGTGCATTGAACTACTCAACTGCTAATATTGAAATTGTGGCAAGGAGAAAGTACACATGTGACCCAACGAAACAATACAGTGTAGCAAACCTTAATTACCCTTCATTTGTTGTGGTCTTCGAGGGCGAACATAGTGTAGAGGAGATTAAATACACTCGCACTCTTACCAATGTGGGTTACACAAGAACATACAGGGTATCAGTTAAGTCAAATGATCCTTCTGTTAACATCTCAATTGAACCAGAAGTGTTAAGTTTTAAGAGAAATGCGAAAAAATTATACACAGTTACATTTACGACATCTGGTTCGAAACCAAATAGTTCTCAAAGTTTTGGAAGGTTAGAATGGTCTGATGGAAAAATTGTTGTTAAAAGTCCTATAGCATTTATTTGGAAATTGCACTGA 573 0.37 MTTAYTTYKNNQTLLDHANKNPATPFDFGAGHVDPISALNPGLVYELTVDDYLSFLCALNYSTANIEIVARRKYTCDPTKQYSVANLNYPSFVVVFEGEHSVEEIKYTRTLTNVGYTRTYRVSVKSNDPSVNISIEPEVLSFKRNAKKLYTVTFTTSGSKPNSSQSFGRLEWSDGKIVVKSPIAFIWKLH 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00770 190 Gene3D Peptidase S8/S53 domain 1 52 IPR036852 GO:0004252|GO:0006508
Trre11g00770 190 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 184 IPR045051 -
Trre11g00770 190 Pfam Fibronectin type-III domain 86 184 IPR041469 -
Trre11g00770 190 Gene3D - 56 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00770 Trre-Chr11 6457339 6457911 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00770 1 187 Subtilisin-like Serine Gene Family AT5G67360 60.638 2.25e-71 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00770 - - gmx:100776647 241.121