Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00769 ATGGAACGACGTAACAGGATGGTTTTTATATCAGATTTTGTTCTATCTTTCATGTGGGTATGTTCTGGTGTTCTTATTAGGTTATTCGTCTTCAAAGTTCTTGGCTTTTCTCATACCCATGTTGCCGATATTGTCAAGATTTCATTTTCCATCATCAACATGTTCTTCTTTGCTTTCCTTGCCAAGATTTCTCATGGTGGGGCCTACAATCCTCTCACTGTTTTTTCTGATGCTATCTCTGGAGATTTTCTTAACTTCCTTTACTGTCTTGGTTCTAGAATTCCTGCTCAGGTGTTTGGATCTATTGTTGGAGTTAGATTTCTTATTGAGACCATTCCTGAAGTAGGACAAGGACCGCGTTTGAATGTTGACATTCATTGGGGAGCATTGACAGAAGGATTACTAACATTTGCAATTGTAAGCATTTCACTTGTGCTTGCTGCATCAAAAATCCGTGGAAGTTTCTTCATGAAGACTTGGATTTCTAGCCTCTCCAAGTTAACACTTAATATACTTGGTTCTGATCTCACCGGTGGTGTTATGAACCCCGCATCTGCAATGGGATGGGCTTATGCTCGTGGCGATCACATAACAAAGGAGCACTTCCTTGTATACTGGCTTGCCCCTATAGAGGCAACTATTTTTGCAGTGTGGACATTCAAATTCTTTGTCCGGCCGGTAATAGAAGGTAAAATAACAGGCTCCAAAAGTAAATCAGATTGA 723 0.4025 MERRNRMVFISDFVLSFMWVCSGVLIRLFVFKVLGFSHTHVADIVKISFSIINMFFFAFLAKISHGGAYNPLTVFSDAISGDFLNFLYCLGSRIPAQVFGSIVGVRFLIETIPEVGQGPRLNVDIHWGALTEGLLTFAIVSISLVLAASKIRGSFFMKTWISSLSKLTLNILGSDLTGGVMNPASAMGWAYARGDHITKEHFLVYWLAPIEATIFAVWTFKFFVRPVIEGKITGSKSKSD 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00769 240 Gene3D Glycerol uptake facilitator protein. 2 232 IPR023271 -
Trre11g00769 240 Pfam Major intrinsic protein 9 218 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g00769 240 SUPERFAMILY Aquaporin-like 8 230 IPR023271 -
Trre11g00769 240 PRINTS Major intrinsic protein family signature 203 223 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g00769 240 PRINTS Major intrinsic protein family signature 131 149 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g00769 240 PRINTS Major intrinsic protein family signature 7 26 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g00769 240 PRINTS Major intrinsic protein family signature 163 185 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g00769 240 PRINTS Major intrinsic protein family signature 89 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre11g00769 240 PANTHER AQUAPORIN SIP2-1-RELATED 6 239 IPR044226 GO:0015267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00769 Trre-Chr11 6453192 6457114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00769 10 240 Major Intrinsic Protein MIP AT3G56950 57.328 4.57e-90 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00769 K09875 - gmx:100786138 353.984