Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00768 ATGAAAACACTTAAGAACCATCTCATTGCAACTCTTTTTGTGATTTTGGTCACGAGCAATGTGTCTCTAACTAGAACAAAGAAGAGTGGGAATGAGAAGATTAGTTACATAGTTCATGTTGCCAAATCTGAAATGCCAACAAGCTTCAATCACCATTCAATCTGGTATGAATCTATTCTTAAGTCGGTATCTGAGTCGGCTGAAATATTGTACACCTATAATAATGCAATTGATGGATTTTCAACAAGTTTAACTGTTGAAGAACTTCAGTCACTAAAGAGTCAAGTTATGGTTCTAAAGGTGACACCAGATAAAAAGTACAAACTCTTCACAACTCGAACACCTAAGTTCCTTGGGCTTGATAAAATTTCTAGTACATTCCCCACAACAAACAAAAGTAGTGACATTATTGTGGGACTCCTCGACACAGGTGTATGGCCTGAAAGCAAGAGTTTTGATGATACCGGATATGGACCAATACCCCACACTTGGAAAGGAAAATGTGAAAATGGTACCAATTTCACAACTTTGAATTGTAATAAGAAATTGATTGGTGCAAGATTCTTTGCAAAGGGATATGAGGCTTCTAGGGGTCCGATTAATGAAACTATCGAGTCTAGATCGCCTAGAGATGATCTTGGCCATGGAACCCACACGGCGAGCACAGCTGTAGGATCACCAGTGGGGAATGCAAATTTTTTCGGCTACGCCAATGGGACAGCACGTGGGATGTTTGTTGGCGCTAGAGTTTCTATCTATAAAGTTTGCTGGAAAAAAGAATGTAGGGGTTCTGATATATTGGCTGCAATCGATCAAGCAATTGCAGACAACGTCAATATTCTTTCTTTGTCTCTTGGAGGACTTCTAGCAAGGAATTATTCTGATGACATCATTGCAATTGGAGCCTTTGCAGCCATAGAGCATGGGATTCTCGTTTCATGCGCTGCAGGAAACTCTGGTCCTTTACATTCAACTGCCACAAATATAGCACCTTGGATTACCACTGTGGGTTCCGGCACACTCGATCGAAAGTTTCTTACATATGTCAATCTTGGAAATGGAAAAAAGTACTCAGGTAGCTTAGATCCAAAGAAGGTAACTGGAAAGATTGTGTTGTGTGATCGTGGAGAGAATTTTAGAATTGAGAAAGGAAATATAGTAAAATATGCTGGTGGTTTGGGTATGGTGGTAGCCAATACTGAGGAATATGGAGAAGAGACTATGGCAGATGCCTACTTTATGCCAGCAATAAATGTGGCTTATACAACTTACAAGAACAATCAAACATTATTGGATGAGGCAACAAAAAGTCCAGCAACTCCATTTGATTTTGGTGTTGGACACGTTGACCCTATTTTGGCACTAAATCCTGGACTTGTCTATGATTTGACAGTGGATGATTATTTGAGCTTCCTATGTGCATTGAACTACTCAGCTGCTAATATTGAAATTGTCGCGAGGAGAAAGTACATATGCGACCCAAAGAAACAATACAGTGTAACAGACTTTAATTATCCTTCATTTGTCGTGGTCTTCAAGGGCAGTCAAAGTGTAGAGGAGATTAAATATACTCGAACTCTTACCAATGTGGGTTCCGCAAGAACATACAAGGTATCAGTTAAGTCAAATGATCCATCTGTTAAGATCTCAATTGAACCAAAAGTGTTAACTTTTAAGAGAAATGAGAAAAAGATATACACAGTCACCTTTACGACATCTGGTTCGAAACCAAATAGCACTCAAAGTTTTGGAAGGTTAGAATGGTCTAATGGAAAAATAGTGGTTAAAAGTACTATAGCGTTTATTTGGAAATTACACTGA 1821 0.3893 MKTLKNHLIATLFVILVTSNVSLTRTKKSGNEKISYIVHVAKSEMPTSFNHHSIWYESILKSVSESAEILYTYNNAIDGFSTSLTVEELQSLKSQVMVLKVTPDKKYKLFTTRTPKFLGLDKISSTFPTTNKSSDIIVGLLDTGVWPESKSFDDTGYGPIPHTWKGKCENGTNFTTLNCNKKLIGARFFAKGYEASRGPINETIESRSPRDDLGHGTHTASTAVGSPVGNANFFGYANGTARGMFVGARVSIYKVCWKKECRGSDILAAIDQAIADNVNILSLSLGGLLARNYSDDIIAIGAFAAIEHGILVSCAAGNSGPLHSTATNIAPWITTVGSGTLDRKFLTYVNLGNGKKYSGSLDPKKVTGKIVLCDRGENFRIEKGNIVKYAGGLGMVVANTEEYGEETMADAYFMPAINVAYTTYKNNQTLLDEATKSPATPFDFGVGHVDPILALNPGLVYDLTVDDYLSFLCALNYSAANIEIVARRKYICDPKKQYSVTDFNYPSFVVVFKGSQSVEEIKYTRTLTNVGSARTYKVSVKSNDPSVKISIEPKVLTFKRNEKKIYTVTFTTSGSKPNSTQSFGRLEWSNGKIVVKSTIAFIWKLH 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00768 606 CDD Peptidases_S8_3 107 341 IPR034197 -
Trre11g00768 606 Pfam Fibronectin type-III domain 502 600 IPR041469 -
Trre11g00768 606 SUPERFAMILY Subtilisin-like 109 356 IPR036852 GO:0004252|GO:0006508
Trre11g00768 606 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 425 IPR045051 -
Trre11g00768 606 Gene3D - 342 359 - -
Trre11g00768 606 Pfam Peptidase inhibitor I9 35 109 IPR010259 -
Trre11g00768 606 Pfam Subtilase family 133 337 IPR000209 GO:0006508|GO:0008236
Trre11g00768 606 Gene3D Peptidase S8/S53 domain 135 341 IPR036852 GO:0004252|GO:0006508
Trre11g00768 606 ProSiteProfiles Serine proteases, subtilase domain profile. 117 606 - -
Trre11g00768 606 Gene3D - 472 602 - -
Trre11g00768 606 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 110 IPR037045 -
Trre11g00768 606 MobiDBLite consensus disorder prediction 201 221 - -
Trre11g00768 606 Pfam PA domain 358 422 IPR003137 -
Trre11g00768 606 FunFam Subtilisin-like protease SBT1.9 24 110 - -
Trre11g00768 606 CDD PA_subtilisin_like 358 422 - -
Trre11g00768 606 Gene3D - 360 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00768 Trre-Chr11 6445027 6447330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00768 417 603 Subtilisin-like Serine Gene Family AT5G67360 58.511 3.09e-63 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00768 - - gmx:100801866 524.628