Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00743 ATGAGTGATGTTAGTGTGAAGGGTTCTTCTTCATGTTTAGCAATAACAGAGAAGAATAATAATAATCAGAAACAAGATGGTAGTTGTGTTGGTATTTTCTTTCAACTATTTGATTGGAATAAAAGACTCACAAAGAAGAGATTTTTCACCAAGAAACTTCTTCCTCCTGCTAATGCAAACCAAGATTCTTTGAAGAGGTTTAAAGGTGATGAGAAAATGCCTAATTCTAAGCTCCATTTGATTGCTAATAGGAACAATGTCGGTTTCACCAACGCGGAAAAAGGTGGAAATTGTGTTATAGAGGTTGAACAACAAAAGCATGAAATGAAAGCACCAAGTCTAGTAGCTAGGTTGATGGGTCTAGAATCAATTCCAGCTTCAAAGAGAGATAAATCGGAGAAATCTTCCTTTTCTGATAGTGATGATGGGGAGGAGTCTTTGGAAATCGGGGTTGCAAATGCAAGGCATGATTCAAGGCCTCAAAAGCTTCGGAAAACGGAGGCAAACGAGAGAAGGGCAGTGACTAGGTTTGGTGCTGAGGCATTGCAAATCAAGAGTGTTTTGTCACAAGTGAGAAAGTATAATCATCATCATCATCATCACCATCATCATCATCATCATCACCATCACACTAATAAACTTGTTACGCCTTTGAAGAGTCCGAGAATTTCTTCCGGGAAGAGCAGGTCTCGAAGCTCAAGGTTGATAGAAGCAGCAGCTACAAAGATCTTGGAACCTGGCTTGCAGCCTACAAGCAGACCCAAATCTTCTCTTACATCTTCCATTTCTAAGTTTCCTTCCAATAACGGCATTGCCATTGAAACGGTTGGACCTCGGCCACAAGATATACACAACCAATCGTGTTATAATGCCGGCATAGACAAGTCAATGGTGGAGCATAGTTGCAAAAATTGCGGCAATTTGCTTGATGTTGAGATCAGCAGACCTATTGATTCAAATGTTTTCACTGATTTTTCTTCGGCATTGACACAAAATGGAAGATTATTCAGTCCTTCTCATGAAAATGATGTAGTTCTTCTGAGAAGTCAAGAGAAGATCATAACTCTTGTTGATGAAGATGTTAAAAAGAATGCTTATTCTTGTAATGAATCCACTTCCATAAGAATACCTGTGCCGGAAAAATGGAATTTGTCACGCCAACTGCATGGAAGCTTAGAGAACGATGACCCATCTTCTTTCGCCTTCAGACTCAAAACTCAAACGCAGGAACAAGTATTAACCGGTGATAAAGTGTTATTTGAATTTGGATCTAGAACAAGTAATATGCAAGATAAGAGAGTTTCATCTGCTGCAACTGCAAGCACTGTGAATGGAAATAAAGATTTTGTTGGTTTGAATCGAAGTCTAAGTGGTCGGACTCGGACTCGGACTCGGACAAGGTCTCCTACCAAGTTGGATAGCTGCAAATTTGATCTTGAGAGGAAAAAGACATTGAATGTCTCACAAGTTGATGATACAGCTTCTGTCGATTCGGTTACATCGAAACAAAGAAATGTTAGTTTTGATGCACAAGAAGGGAAAAGGAGGAGTTCTGATGCTTTCTCTCCAAACAATTCTAATGTCAAAAGTAAACGAGGCGGTTATCGGAAAACTGATAAGATCAATAGGGTAGTTTCATCTACCTTTAGTTCACCTCTTAAGAAAAAGGAAGAAACAAGAAGTGATTATGAGATTAAGACTTGTTTCCAAAGACATCATCCACCCTTAAGAGAAGATGTTATAGGTACTTTTCTAGAACAGAAGTTGAAAGAATTAAGGTCTAGAGAATATAAGGAGTTGGTTAATGGTGATCAACCTAAAAAATCATCTGCTTTGATTCTCCAAGAATTGATATCTGTTCTTAATGTGGAGCGACTAATATGTACCGATGATCGCATGTTCAATGACAAAGATCACAAGTATGAAACAAAACATGTTGGATTATTTGGAACTTCTTGCAATGGTAATCATCTTAGTCCTGGATCAGTCCTAGAAGCTTCCTTTTCTTCCAGTAGTCTCGAAGAAAGCTCAGGGCATTGTTTTCATCCGGACTCTATAAATTGTTCGTATGATCAACCAGAACGGTTGGAACATGAAGCCGAACTTTTAAATTCTGAAACATCATTTAACATTGGGAAGATAGGTTATAAGATACTGACTGAACTCGTTAACCGAATTCATAGTATTTTGCAAAGTTTAGATTGTTTTTGGACAAGATTAACAGAAAGCAAGCTTAATCATATGAAAGAAGTTATCTTCAATGCTGAATTGATTCTTGGAAATGTGACTAGGCACAGTGATGATGAAGTGCTGTCACAGCTTCTCATTTCTTGCATACTTGATGAACTAGACAACATTATTGCAACCGATGCTATGCTAAGAAATTTCAACCAAAGCAAAATAAAGGGATTTGTATTTGATTGTGTAATCGAGTATCTAGAATCAAATTGCTCCCAACATTATTATAGCCTGTTTAAGTCACGGTGTGCATGGACAAAGGTTCCTTTATGCATAAAAGGCGATATTTTGGTTCAAGAGGTGAAGAGTGAGATTATGAAGTGGGAATTTTTAGCAGGAATGGAGCCAGATCAAATAATAGAATGGGAGATGAATCACTCATTGGGAAAATGGACAGATTTCAACATTGAAGCTTTTGAGTTTGGTGTTGATATTGGTGTGGATGTGCTTCAAATTTTGCTTGATGAAATTGTTGAAGACCTTGTAAATTTCAGGAAAGTTACTGTTTGA 2748 0.3781 MSDVSVKGSSSCLAITEKNNNNQKQDGSCVGIFFQLFDWNKRLTKKRFFTKKLLPPANANQDSLKRFKGDEKMPNSKLHLIANRNNVGFTNAEKGGNCVIEVEQQKHEMKAPSLVARLMGLESIPASKRDKSEKSSFSDSDDGEESLEIGVANARHDSRPQKLRKTEANERRAVTRFGAEALQIKSVLSQVRKYNHHHHHHHHHHHHHHHTNKLVTPLKSPRISSGKSRSRSSRLIEAAATKILEPGLQPTSRPKSSLTSSISKFPSNNGIAIETVGPRPQDIHNQSCYNAGIDKSMVEHSCKNCGNLLDVEISRPIDSNVFTDFSSALTQNGRLFSPSHENDVVLLRSQEKIITLVDEDVKKNAYSCNESTSIRIPVPEKWNLSRQLHGSLENDDPSSFAFRLKTQTQEQVLTGDKVLFEFGSRTSNMQDKRVSSAATASTVNGNKDFVGLNRSLSGRTRTRTRTRSPTKLDSCKFDLERKKTLNVSQVDDTASVDSVTSKQRNVSFDAQEGKRRSSDAFSPNNSNVKSKRGGYRKTDKINRVVSSTFSSPLKKKEETRSDYEIKTCFQRHHPPLREDVIGTFLEQKLKELRSREYKELVNGDQPKKSSALILQELISVLNVERLICTDDRMFNDKDHKYETKHVGLFGTSCNGNHLSPGSVLEASFSSSSLEESSGHCFHPDSINCSYDQPERLEHEAELLNSETSFNIGKIGYKILTELVNRIHSILQSLDCFWTRLTESKLNHMKEVIFNAELILGNVTRHSDDEVLSQLLISCILDELDNIIATDAMLRNFNQSKIKGFVFDCVIEYLESNCSQHYYSLFKSRCAWTKVPLCIKGDILVQEVKSEIMKWEFLAGMEPDQIIEWEMNHSLGKWTDFNIEAFEFGVDIGVDVLQILLDEIVEDLVNFRKVTV 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00743 915 Pfam DUF761-associated sequence motif 103 130 IPR032795 -
Trre11g00743 915 MobiDBLite consensus disorder prediction 217 235 - -
Trre11g00743 915 MobiDBLite consensus disorder prediction 193 215 - -
Trre11g00743 915 MobiDBLite consensus disorder prediction 495 539 - -
Trre11g00743 915 MobiDBLite consensus disorder prediction 250 264 - -
Trre11g00743 915 MobiDBLite consensus disorder prediction 193 264 - -
Trre11g00743 915 Pfam Domain of unknown function (DUF4378) 780 902 IPR025486 -
Trre11g00743 915 MobiDBLite consensus disorder prediction 517 531 - -
Trre11g00743 915 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 12 906 - -
Trre11g00743 915 MobiDBLite consensus disorder prediction 125 145 - -
Trre11g00743 915 MobiDBLite consensus disorder prediction 125 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00743 Trre-Chr11 6218842 6222558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00743 9 907 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.416 1.48e-85 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00743 - - tpra:123910908 1475.69