Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00705 ATGGAACTCGATTCATCTTCACTACAACTCAATCAGAGCAAGGTTGATGCCAATGGAAACCAAGTGAGTCGTAACAATGCACGCGGAATTCGTGTTATTGGTAACAGAATCTATGATTCTGAAAATGTCAAAACTTGTCATCAGTGCCGGCAAAAAACAAGGGATTTTTCTGCAGGATGTAAGAATCCACGAGATGGGAAGCCTTGTCTCATTAGGTTCTGCCACAAATGCCTCTTGAATAGATATGGGGAAAAGGCAGAAGAGGTAGATCTATTGAATGATTGGAGTTGTCCAAAGTGCAAAGGCATTTGCAACTGCAGTGTTTGCATGAAAAAAAGAGGTCATCAACCTACTGGTTTACTAGTTCGTACTGCCAAGGCATCCGGTTTTAACTCTGTGTCAGAAATGCTTAGCAAGAAGGCTTCTGCAGATTTGGAATCGAACAATGCTGCAGTTTTGCCTATTAAGGAAGCTACTTCGGAAAAGGTGCTTGTAGTGGGTCTATCAGGGGAACCAAGGAAGGAAAACTCATTAGGTGGGAAAAAAGATTTAAAGGTTGAAAATGAGAAAACCAAGAAAATGAAGCGGGAAAAGCTAAAGGAAATATCTAATTGTAACAATGTTGATGATGCTCCCCAGAACAAGAAATTGAAAATCTCTAAACTTTGTAATGGAGCTTCAAATGGTGAATTGAAAAGAAATGCAAAGGCTGAAATGAAAACAAAAGTTGAGGAGAATCAAGGTATGATTTGTGGTCAAATGGATGGTCCTGTTGTGATGGATGATGGTGACAATGCTAGTGCCAAGTCTCAAACAAATGCTACAGTTTTGCATGCTCAAAAAATTAAGGAACAGACTCCTTTGCCTCCTGGAACTGAGATGACAAAAATATTAGACATTGAGTTTGCACCAGAAGATGTTGGGAATGCGTTACAGTTTTTAGAATTCTGTAGAGTGTTTGGAAAGGCTCTTGATGTCAAGAAAGGAGAAGCTGGAGCTATTTTAAGAGCATTGGTACGTAAGCAAAATCTGCGACGTGGACAAAATACTTTAGTGGTCGAGTTCCAAATCAAGTTGTTGAATTTGATACTATCTGAATCAGAAACTGAGTCTTCATCCTTAACTGCTAGCAATGGAAAAAATTCATGGTTGAAAGTTTTGGAGGATTTAATTACTGAATCTGATCTTGGACTAAAAGAGTTTGCGTTGGATTGGCTTAATAAAGGCATTAGCGGATATAATGATTTGGAAATATCTAAAAAGCTTATCCTTCTGAATTTTATCTGTGATGAAGCTTTGGGCACAATGAAGCTAAGGAGTTATATTGATGACCAAAATGCAAAAATTGCCGAAGAAAAGAAAGCAGCAAGATCTAAGGTTGCTGAAGCTAAGGAAAAGGAAAGAAGTCTTAAGCAACAGCTGCAGGATGAGATGGCAAAAGCTGTTGTATCAAATGGGACTAGCCTCTCAATTTCAGAATATGATGCTCTTGTTTCAAAAATTAAAAGTGAAGCAGCTAAAGCTCATACTGAGTTGCTTGAGGCAAAGGGCACAATTCCTAAATGGAACCAATGTTGTGATGCAGTGAGAATTGAGCCGGAGTACTTAGATAGCAGTGGTAAGGCATTCTGGAAATTAAGAAGCTGTAATGATGAATATGCTTTCTTGTTACAAGATGTGAAGATCCATGATGGTGATGCTGTTGAAGTTGATGAGAAATGGTTTGTTTATGGAGCTGAGCAGAAGGATGAGGTTAATAAGTACATTTCCTCTAGGAGAAATTGTTTACCAAAGCTTACTTCAGTATAA 1809 0.3847 MELDSSSLQLNQSKVDANGNQVSRNNARGIRVIGNRIYDSENVKTCHQCRQKTRDFSAGCKNPRDGKPCLIRFCHKCLLNRYGEKAEEVDLLNDWSCPKCKGICNCSVCMKKRGHQPTGLLVRTAKASGFNSVSEMLSKKASADLESNNAAVLPIKEATSEKVLVVGLSGEPRKENSLGGKKDLKVENEKTKKMKREKLKEISNCNNVDDAPQNKKLKISKLCNGASNGELKRNAKAEMKTKVEENQGMICGQMDGPVVMDDGDNASAKSQTNATVLHAQKIKEQTPLPPGTEMTKILDIEFAPEDVGNALQFLEFCRVFGKALDVKKGEAGAILRALVRKQNLRRGQNTLVVEFQIKLLNLILSESETESSSLTASNGKNSWLKVLEDLITESDLGLKEFALDWLNKGISGYNDLEISKKLILLNFICDEALGTMKLRSYIDDQNAKIAEEKKAARSKVAEAKEKERSLKQQLQDEMAKAVVSNGTSLSISEYDALVSKIKSEAAKAHTELLEAKGTIPKWNQCCDAVRIEPEYLDSSGKAFWKLRSCNDEYAFLLQDVKIHDGDAVEVDEKWFVYGAEQKDEVNKYISSRRNCLPKLTSV 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00705 602 Coils Coil 446 480 - -
Trre11g00705 602 Pfam DDT domain 305 365 IPR018501 -
Trre11g00705 602 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 38 137 IPR018866 -
Trre11g00705 602 ProSiteProfiles DDT domain profile. 304 369 IPR018501 -
Trre11g00705 602 SMART testlast3 304 369 IPR018501 -
Trre11g00705 602 Coils Coil 181 201 - -
Trre11g00705 602 PANTHER OS05G0300700 PROTEIN 24 529 IPR040221 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00705 Trre-Chr11 5796195 5800520 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Trre11g00705 zf-4CXXC_R1 2.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00705 - - mtr:25495611 914.45