Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00690 ATGGATCCTCCTCGTCGAGCACCACGTACAGTAATCGACCCTGTCCCTAAATTCCGTCAAGTCGGATTCTTCGCTCCACCCGACCGTTCACAATCGGGTCCACCCGACCCGACTCACTCATCTCCTCCTATCGCCGACGCATCCGCTTCTCTCTCCCCCGTTATGATTCCTCCGCCGCGTCATCTTTCCGATAACCTAATTCTCCATGCTCGTGCGGCGAATTCTCCTCGCCGTGCGGCGGAGTCGATTACTGTTGGTGGAAGTAATTCTGATGCTCCTGTTTCGCCGGCACCGTCGTCTTCTTATTCGAGTAGGTTTGTTGTTGGTGGTGATAGAGGGTTTTTTGATGGGAAGGGGAAGGATAATGGAAAAGTTGTGGCTTCTTCATTTCCGAGAGGTGGATTTGATTTGACTGCGTTGAAAGGGAATGTTGCTGCTTCTGCTGCTGTTGTTGTTCCGGCGAGTCAGTTGACTACTGTTTCTGTTGTCAATGATTCTCTTGGGATTCCTGAAAAAGAAAAATCAAACAAAGGAGGAGGGTCAGCTGGGGAAATGAAAGACCAATCTAGTTCAAAACAGCAGAAACCAAAACCCACGAAAGCTGAAAGACGTGCACTTCAAGAAGCTCAACGAGCTGCAAAGGCTGCTGCAAAAGGCGAAGGAAATAAGGCGTCTGGAACTGCTACATCAGCGAATGCAAAACCAGCTAAAGCAGTAAAGCCTGCACAGAAAGCTGATACTGCCTCAGTTGCAGCCACCGAGAAGAAGGGGGGTGATTTTCCACCTGAAAAAGATAGAAAGAAAGATGCCCCTCAACCACGCCTGCAGTATGATGACAAGAGCCGGGTGGAAAAAGCTAAACGTCGTTCTGTGGTGAAACAAACTGAGGCTAGGAACAGAGTTGAGTTGTTTAGGCATTTACCACAATATGAGCATGGGAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCGATCTTCATCCTGTGCATCCTGCTGTTTATAAGGTGGGTTTGCAGTACATATCTGGAGATATATCTGGTGGCAATGATCGTTGTATTGCAATGCTTCAAGCATTTCAGGAGGCAATCAAAGACTACAAGGTTCCACCTGAGAAGAGTCTCGGAAGAGATTTGACAGCAAAAATTGGTAGTTATGTATCATTTCTTAATGAGTGTCGACCTCTGTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAGAGTCAGATAGCCAAGCTACCTTTAACCTTGTCTGAGTCAGAAGCAAAAACTTCTCTCCACTCAGATATTGAACGTTTTATAAGTGAGAAGATCATACTTGCCAACAAGGTGATAGTCAAGCATGCCGTCACCAAAATAAGAGATGGGGATGTTCTTCTAACTTACGGGTCATCATTGGCTGTTGAAAATATTCTTTTACATGCACACGAGTTAGGAAAACAGTTTCGTGTTGTGATAGTTGATTCTCGTCCAAAGCTTAGAGGCCAACAGTTGCTCCGCAGGCTTGTGGAGAAAGGTCTTAACTGTACATACACTCATATAAATGCTGTTTCCTACATGATGCATGAAGTTAGTCGAGTTTTTCTGGGTGCTGAATCGATACTGTCTAACGGAACGGTATATTCAAGAGTGGGTACTGCAAGTGTTGCAATGGTTGCTCATGCATCCCGTGTACCAGTCATAGTATGTTGTGAGGCCTATAAATTTCATGAAAGGGTACAGCTGGATTCAATTTGCTCGAATGAGCTTGGTGATCCAGATGCCATTTCAAATGTTAAGGGTAGAGAGGATGTCAACCACTTGGATGGTTGGGCCGATATTGAAAATCTACAACTTCTAAATCTGATATATGATGCAATGCCTTCAGATTATGTCTCAATGATAGTCACGGATTATGGCATGGTCCCCCCTACAAGTGTGCCTGTAATTGTAAGAGAATATGGGAGGGAACAGGTCTGGGTATAA 1965 0.4509 MDPPRRAPRTVIDPVPKFRQVGFFAPPDRSQSGPPDPTHSSPPIADASASLSPVMIPPPRHLSDNLILHARAANSPRRAAESITVGGSNSDAPVSPAPSSSYSSRFVVGGDRGFFDGKGKDNGKVVASSFPRGGFDLTALKGNVAASAAVVVPASQLTTVSVVNDSLGIPEKEKSNKGGGSAGEMKDQSSSKQQKPKPTKAERRALQEAQRAAKAAAKGEGNKASGTATSANAKPAKAVKPAQKADTASVAATEKKGGDFPPEKDRKKDAPQPRLQYDDKSRVEKAKRRSVVKQTEARNRVELFRHLPQYEHGSQLPDLEAKFFDLHPVHPAVYKVGLQYISGDISGGNDRCIAMLQAFQEAIKDYKVPPEKSLGRDLTAKIGSYVSFLNECRPLSISMGNAIRFLKSQIAKLPLTLSESEAKTSLHSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSLAVENILLHAHELGKQFRVVIVDSRPKLRGQQLLRRLVEKGLNCTYTHINAVSYMMHEVSRVFLGAESILSNGTVYSRVGTASVAMVAHASRVPVIVCCEAYKFHERVQLDSICSNELGDPDAISNVKGREDVNHLDGWADIENLQLLNLIYDAMPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWV 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00690 654 MobiDBLite consensus disorder prediction 190 209 - -
Trre11g00690 654 MobiDBLite consensus disorder prediction 73 103 - -
Trre11g00690 654 Gene3D - 440 647 IPR042529 -
Trre11g00690 654 MobiDBLite consensus disorder prediction 161 292 - -
Trre11g00690 654 SUPERFAMILY NagB/RpiA/CoA transferase-like 328 647 IPR037171 -
Trre11g00690 654 MobiDBLite consensus disorder prediction 1 57 - -
Trre11g00690 654 Pfam Initiation factor 2 subunit family 345 637 IPR000649 GO:0044237
Trre11g00690 654 MobiDBLite consensus disorder prediction 257 292 - -
Trre11g00690 654 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 47 651 - -
Trre11g00690 654 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00690 Trre-Chr11 5660553 5665778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00690 5 654 Eukaryotic Initiation Factors Gene Family AT5G38640 63.001 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00690 K03680 - gmx:100775998 990.334