Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00688 ATGCTTGCCAAGGGTTATAATCTTGGTGGGAATACTTGGAGAGAAATTCCAAGAAATACTTCGCCAGCTGTCTCAAACATTCTACGCAAGCGAGGTTTTGATGAATTAGGCAATCAATATGTAGGAAATCCAGTAAGACGCAACACAAACTGGCGATATGATCCTGATATGGCATTCACCCGTGATTGGATAAAAACGAAAATTTTTGAAATCACTGGTCCTGTATTACACAATGAGCAACTTGCTCCTATGCTGGAATTATCTCTATTTACCACTGCTGCTTCAAAGGAGGAATATATGAACATGGAGACGCTGAATCGGCGTGTGCAAGCTCTAATGAATGCTTTTAAGAATTATCCCGTGCCACAAGGGGGACTTTCTGACCGTTCTACTGTTCATGACTTGCCTTGTTTTCCTTATGATAGTTCATCAATCCCCCAACTTGCTGATATGGATGTGCTTTGTAACTTACCTGTTTCTGGTGGTGGAAGCAATCTGGATTCTAACACCAGATCAATAAGCAACTATTTTCCTCAGCAACACACAAATAATTTGGAGATGGATCTGAAAAAATACAGTGATTGTTTGGGGACTATTCAGAATAATGATTCTAAAAGTTTTCCTACTACAAGGGGAATATCCCTCCAATCTGGAGATTTTAATTTTAAGCTCCCTCAACCTTCCTTGGTGAATAGTTCAGTATCCCTCCAACCTGAAGATTTTAATTTTAAGCTCCCTCAACCTTCCTTGGTGAATAATTCAGAATTTTCTAATCAGTTTCCTGGCTCGAGGTCTTTCGTAGACTTGGAAGATACAATGCCATATCAATCACAGAAGTTGCATTTTCAGAAGAATTCCACTTTAAGACATGATGTTAATGATGTTCCTACTGGCAATACTGAATCCATACTAAGACCTGCGAAAAGACATAAAATGATGGATTCAGGTTTTGGTGTATCTTTGATTAACTATCCAAGTTTTGATCGATGGAATTGCAAGATGGTTCAACCTCATTCTTCTCAAACACTTCCGAAAGTGCAGCAACAGTCAGAATTTCCTCTCTCTTCTATCAGTTATGAGGGCAATGGGGAACAATTTACAAATCCTATGTTTCATTCTATGGGAGTTAGAGGGATAAACAACAATGTGATGGTTGGTACATTTGGACAGACCTTGGAGGAGCCAGGCCTTGAAAGCCATGATGTGATGGATAGCAACAGCTTAAAGGAAATTGTTGTTAACTTGAAATCCAGGATGCCTCTTGACATGGATCCTATTCCTACTGATAGAGAGGATATACAAAGCAGAACTGAATCTGACCAAGGCATTAGATTAAATTCCAGTATGCATAATGCTATTCCTACTGATGGAGAAGATATACAAGAAACGACTGAATTCTGGACAAATGCCAAAAAGAAAGTCGATGAGCTAACAGATGATGAAGAGACGATAACAAAGTCCTCAATTACAACAGTTAGTGAGAAAAGGAACTATATGATTTATGATATTTCTGGACAGAATTGCGAGACTGGAATGATCCCCTCGAAAGGCTTAGAGGCTGGTCAAATGTCCGATGAGCAAGACTCCATATTCTATGGCATGATAGACAGCAAAAACCCGGTGGAAACCGACGACATGCCTACTCCCAGGAGCGAACTTATTATTATTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGAAGAGGACATACAAGGCAGAACTGGATTCAACCAAGAGGGGATAAATTCTAACAAGGAATTCATTGAATCAAAAGATGATCATGAGATGCACACTGAGTCCTCAAATACAACAGTTATTGAGATAAACAACTATGTGGCTGTTGATACACTTGGACAGACTTTCAAGACTGAAAGGTTTCCCTCTAAAGGCTTAGAAGCTAGTCAGATATCAGAGGAGAAACATCTTGAAAGCCATGGTGTGCTACACAGCAGCAAACCAATGGAAATTGACAATGGATCAAATTCCAATATCCATGCTCTCATATGCAAGGTTCCAATTCCTATTGATGTAGAGGACAAACAAGACATAATTGGATTCAACCAGGAGGGGACTGATGCTAAAAAGAAAGTCAGTGAGCCAAAAGCTGGTCAAGAGAAGCAAACAAAATCCTCAAATAAAATAGCTGATGCTGTTTCCTTGATTGATTTGTTCACGCCAGATCAAATAAAAGAACATATTAGTAGTCTGACAAAGAAACCTTTTAAGGTTAGAACTGAGGAGGAAAGCGGAATTGATGCAAACACGTGTCAATTATGTGAAGAGAAAAAGCTTTACTTTGAAGCAGTACCGATTCTTTGTTTATGTTGTGGAAGGACCATCAGGAAAAATACAACATATTTCTTTAGAAAGGAAGAAGAATTTGATGCACAGCGTTGCATTTGCTCTGGGTGTTATAAACGTAAAGGTTCACATGTTATATTCAACGGGATATCTATTTCTAAGCAACATCTTGAGAGAAAGACTAATAACGAATTAATTGAAGAAGCGTGGGTTGAATGCAATAAATGCAAAAGATGGCAGCATCAAGTATGTGCACTCTACAACAACAAAAGAGATTTGGACTGCAATGCTGAGTATATATGTCCTTTCTGCCGCTTAATGGAAATTGAAAATGGAATACGTGTTCCCTTACCAAAGAGTGCTATTTTTGGTGCTAAGGACTTGCCTAAAACCATGCTTAGTGACCACTTAGAGAAAAGACTTTTTGAGCGTCTCAAGCAAGAGAGAGCAGACTGGAATAATGATAAAGGGAAGGAGAATCCTGACAAGGTTTTAGCAGAAGAAAGTCTTTCTATTAGAGAAGTGTTATCTGTCGACAAACAATTGAAAGTGAAGAAGCAGTTTCTGGACATCATTCCAGAGGAGAATTACCCTGCTGAATTCTCTTATAGATCAAGAGTTATTCTTTTGTTTCAACAGATTGAAGGAGCAGATGTATGCATTTTTGCAATGTATGTCCAGGAGTTTGGATCTGAATGCGCCAATCCGAATCAGCGATGCGTATACATTTCATATCTTGATTCTGTTAAGTATTTTAGACCTGAGAGAAGTGCTGCGGGTGGAGGAGCACTTCGTACCTTCGTATACCATGAGATATTGATTGGATACCTTGATTTTTGTAAGAAGCGTGGTTTCTCAACTTGTTACATATGGGCCTGTGCTCCTTCAAAAAAAGAGGATGATTATATACTATATTGCCACCCAGAAGAGCAAAAGACTCCACATAATGATAAGCTACGCCGCTGGTATCTTTCAATGCTAAATAAGGCCACTGAAGAAAATATTGTTGTTGATTTAACCAACCTATATGATCATTTCTTTCTTCCTACTGAAAAATCTAACTCCAAGTTGTCAGCTTCTCGTTTGCCATACTTTGATGGAGACTACTGGTGTAATTATGCTATGTTAGCAGCTACGGAGATTGAAAAAGAAAGTAGAGGAGACTATGAAAAGATGTTGAAGAAACAAGTGCCAAATAGAGCTTTAAAGTCAATGGGACATGACAATCCTTCCAAAGACACTGCCAAAGACATTCTGGTGATGCAAAGATTGGGCCAACATATACTCGGTACCAGGGTAAATTTCTTAATAGCTCACTTGCAATATTCATGCATGCACTGCCGTGAAGTGATAATCTCTGGGAAGCGATGGTTTTGCACCAAATGCAATAAATTTCAGGAGTGTGAAAGATGCCATAGTTCTGATGTACACACTTCAAAGAATGGCGAGGTGCATACACTTTGTCAGGTCATTGTCGATGATATCCCCTCCAACACTAAACATGATGATGATATCATCGTTGAGAGTGGATTATTTGATAATAGGAACATCTTTTTGAGTTTCTGCCAGAAGTATTTGTTTCAGTTTGACAGACTCCGCCGTGCAAAGTATTCCTCAATGATGATCCTCTACTATCTAAACAATCCTACTCTGGTGATTGCTGGAACATGTAGCATTTGTTGCGCATGCAATTTATTCCAAGAGTGCTGGAAATGTGAAATTTGTCCAGAATGTACCATTTGCTCTGCTTGCTATAAGGATAGAGGTGCTGACTGCCATGAACACAAGTTGACTCATAATGAACAGACGTCGACTCAAAATGAACAGACGTCGACTCAAAATGAACACAAGTTGACTCAAAATGAACACAAGTTGACTCAAAATTATTCAACACCACTATGTCAATACGGAAATCAGGAGTTAAATGAGGAAAAGATGGTGAAACTGCTGTATGTTTTGAAGCATGCATCTCAATGTCGCGCAACAAACGCTGAACCATGCTCTTATCCAAACTGTTCTCAAATCAAGAAGCTCTTCTCCCATGCCAGTAGGTGTGAAATTCGAGTAAATCAAGGCTGTCAGCTTTGCAAAAAGACATGGTTTATACTTACTGCTCACTCCAGGCACTGTGAAGACTCAGAATGTAGAATACCACGTTGCAGGGATCTGAAGAAGCATGAAGAAATGAGAGCAATACATTCTGCATCTGAGCGTGGAGCTAAAGTTGTTGAAAGCGAAGTTGCAGTCGCTGATTAA 4584 0.3914 MLAKGYNLGGNTWREIPRNTSPAVSNILRKRGFDELGNQYVGNPVRRNTNWRYDPDMAFTRDWIKTKIFEITGPVLHNEQLAPMLELSLFTTAASKEEYMNMETLNRRVQALMNAFKNYPVPQGGLSDRSTVHDLPCFPYDSSSIPQLADMDVLCNLPVSGGGSNLDSNTRSISNYFPQQHTNNLEMDLKKYSDCLGTIQNNDSKSFPTTRGISLQSGDFNFKLPQPSLVNSSVSLQPEDFNFKLPQPSLVNNSEFSNQFPGSRSFVDLEDTMPYQSQKLHFQKNSTLRHDVNDVPTGNTESILRPAKRHKMMDSGFGVSLINYPSFDRWNCKMVQPHSSQTLPKVQQQSEFPLSSISYEGNGEQFTNPMFHSMGVRGINNNVMVGTFGQTLEEPGLESHDVMDSNSLKEIVVNLKSRMPLDMDPIPTDREDIQSRTESDQGIRLNSSMHNAIPTDGEDIQETTEFWTNAKKKVDELTDDEETITKSSITTVSEKRNYMIYDISGQNCETGMIPSKGLEAGQMSDEQDSIFYGMIDSKNPVETDDMPTPRSELIIIDDDDDDDDDDDDDDDDDDDEEDIQGRTGFNQEGINSNKEFIESKDDHEMHTESSNTTVIEINNYVAVDTLGQTFKTERFPSKGLEASQISEEKHLESHGVLHSSKPMEIDNGSNSNIHALICKVPIPIDVEDKQDIIGFNQEGTDAKKKVSEPKAGQEKQTKSSNKIADAVSLIDLFTPDQIKEHISSLTKKPFKVRTEEESGIDANTCQLCEEKKLYFEAVPILCLCCGRTIRKNTTYFFRKEEEFDAQRCICSGCYKRKGSHVIFNGISISKQHLERKTNNELIEEAWVECNKCKRWQHQVCALYNNKRDLDCNAEYICPFCRLMEIENGIRVPLPKSAIFGAKDLPKTMLSDHLEKRLFERLKQERADWNNDKGKENPDKVLAEESLSIREVLSVDKQLKVKKQFLDIIPEENYPAEFSYRSRVILLFQQIEGADVCIFAMYVQEFGSECANPNQRCVYISYLDSVKYFRPERSAAGGGALRTFVYHEILIGYLDFCKKRGFSTCYIWACAPSKKEDDYILYCHPEEQKTPHNDKLRRWYLSMLNKATEENIVVDLTNLYDHFFLPTEKSNSKLSASRLPYFDGDYWCNYAMLAATEIEKESRGDYEKMLKKQVPNRALKSMGHDNPSKDTAKDILVMQRLGQHILGTRVNFLIAHLQYSCMHCREVIISGKRWFCTKCNKFQECERCHSSDVHTSKNGEVHTLCQVIVDDIPSNTKHDDDIIVESGLFDNRNIFLSFCQKYLFQFDRLRRAKYSSMMILYYLNNPTLVIAGTCSICCACNLFQECWKCEICPECTICSACYKDRGADCHEHKLTHNEQTSTQNEQTSTQNEHKLTQNEHKLTQNYSTPLCQYGNQELNEEKMVKLLYVLKHASQCRATNAEPCSYPNCSQIKKLFSHASRCEIRVNQGCQLCKKTWFILTAHSRHCEDSECRIPRCRDLKKHEEMRAIHSASERGAKVVESEVAVAD 1527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00688 1527 ProSiteProfiles Zinc finger TAZ-type profile. 1415 1499 IPR000197 -
Trre11g00688 1527 SUPERFAMILY TAZ domain 1421 1500 IPR035898 -
Trre11g00688 1527 ProSitePatterns Zinc finger PHD-type signature. 808 880 IPR019786 -
Trre11g00688 1527 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 898 1327 IPR031162 GO:0004402
Trre11g00688 1527 SUPERFAMILY RING/U-box 1311 1376 - -
Trre11g00688 1527 Gene3D - 1213 1262 IPR043145 -
Trre11g00688 1527 MobiDBLite consensus disorder prediction 554 592 - -
Trre11g00688 1527 Pfam Histone acetylation protein 941 1156 IPR013178 GO:0004402|GO:0006355|GO:0016573
Trre11g00688 1527 SMART PHD_3 807 881 IPR001965 -
Trre11g00688 1527 SUPERFAMILY RING/U-box 1195 1255 - -
Trre11g00688 1527 PANTHER CBP/P300-RELATED 80 1515 IPR013178 GO:0004402|GO:0006355|GO:0016573
Trre11g00688 1527 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 839 884 IPR013083 -
Trre11g00688 1527 MobiDBLite consensus disorder prediction 555 579 - -
Trre11g00688 1527 SMART KAT11_2 932 1227 IPR013178 GO:0004402|GO:0006355|GO:0016573
Trre11g00688 1527 Pfam TAZ zinc finger 1425 1496 IPR000197 -
Trre11g00688 1527 SUPERFAMILY FYVE/PHD zinc finger 843 882 IPR011011 -
Trre11g00688 1527 Gene3D TAZ domain 1412 1525 IPR035898 -
Trre11g00688 1527 MobiDBLite consensus disorder prediction 700 719 - -
Trre11g00688 1527 SMART TAZ_2 1416 1497 IPR000197 -
Trre11g00688 1527 ProSiteProfiles Zinc finger ZZ-type profile. 1215 1271 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00688 Trre-Chr11 5626299 5632929 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Trre11g00688 HAT_KAT11 2e-31 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00688 K04498 - aprc:113866525 1159.05