Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00683 ATGGAAGCTCCGAACAACCACCGTGAAAAGCTTCGTCGAGTCTCCAGCAAAAACAGCCACCGGCCTCGTCTTTCTCGGCAACGATCTTTCACAAGCGATATTGAACACGTCGCCGCAGAAACTTACTTGATCACTCGCCTCGCCTTCACGCTTCTTCAGTATCTCGGGGTTGGTTACCGTTGGATTACAAAATTACTAGCTCTTGGATGTTATGCCATGCTACTTATGCCAGGTTTTCTACAAGTTGCATATTGCTATTTCTTCTCAAACAAGGTAAAGCGGAGCATTGTTTATGGAGATCAACCTAGAAACAGGTTGGATCTGTATCTTCCTGCTGATGTCAGTGAACCTAAGCCAGTCTTGGTCTTTGTAACCGGAGGAGCATGGATTATTGGGTATAAAGCATGGGGCTCCCTTTTAGGATTTCAGTTGGCAGAAAGAGACATTATAGTGGCATGCATTGATTACAGAAATTTTCCTCAAGGAACCATCAGTGACATGGTAAATGATACTTGTCAGGGAATTTCCTTTGTCATCAACAACATAGCTAGTTATGGAGGCGACCCTAAAAGGATTTACCTGATGGGACAATCTGCTGGTGCGCATATTTCGTCTTGTGCTTTATTGGAACAAGCAACCATGGAATCTGGAAATGGAGATGGTGTTTCTTGGAGCGTTTCCCAGATAAAAGCTTATTTTGGGTTATCAGGAGGATACAACTTATTGGATTTAGTCGATCACTTTCACAACCGTGGCTTGTATCGTTCCATTTTCTTAAGCATAATGGAAGGTGAACAATCTCTGAAGAAATTTTCTCCCGTAATCAAAATTCAAGATCCATCCATCAAAGATTCCATTCCTCTCTTGCCCCGTATAATTCTTTTCCATGGAACCGGCGATTATTCCATACCATCAATTGCCAGTGAACAGTTTGCTGATGCTCTTAAGAAGGCAGGGGCAAGAGCTGACCTGATTCTATATGATGGGAAAACACATACAGATTTGTTTCTTCAAGATCCACTCCGAGGTGGTAAAGAGGACCTATTTGATCATGTAGTTTCTATAGTACATTCCAATGACAGTGATGCTCTTCTAAAGGATGCCACGGCACCGCCAAGAAGACGGCTTGTTCCTGAGATTCTATTAAAGTTAGCTCATAATATCAGTCCCTTCTAA 1176 0.426 MEAPNNHREKLRRVSSKNSHRPRLSRQRSFTSDIEHVAAETYLITRLAFTLLQYLGVGYRWITKLLALGCYAMLLMPGFLQVAYCYFFSNKVKRSIVYGDQPRNRLDLYLPADVSEPKPVLVFVTGGAWIIGYKAWGSLLGFQLAERDIIVACIDYRNFPQGTISDMVNDTCQGISFVINNIASYGGDPKRIYLMGQSAGAHISSCALLEQATMESGNGDGVSWSVSQIKAYFGLSGGYNLLDLVDHFHNRGLYRSIFLSIMEGEQSLKKFSPVIKIQDPSIKDSIPLLPRIILFHGTGDYSIPSIASEQFADALKKAGARADLILYDGKTHTDLFLQDPLRGGKEDLFDHVVSIVHSNDSDALLKDATAPPRRRLVPEILLKLAHNISPF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00683 391 Gene3D alpha/beta hydrolase 87 340 IPR029058 -
Trre11g00683 391 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 28 341 - -
Trre11g00683 391 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 88 340 - -
Trre11g00683 391 Pfam BD-FAE 106 315 - -
Trre11g00683 391 MobiDBLite consensus disorder prediction 1 27 - -
Trre11g00683 391 SUPERFAMILY alpha/beta-Hydrolases 87 357 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00683 Trre-Chr11 5581756 5587096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00683 26 391 Carbohydrate Esterase AT1G26120 69.126 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00683 K15889 - gmx:100788814 632.869