Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00622 ATGACAATTGGAACTCTTGCACCGAAGGCAGACAATAAGAAACCAAGGAAGAAGAAGGAAGTTGTTGATGAGAATGCGCCTTTGTTACCTAAGACTCAAGAAACAGATGCCGAATTCCATGAATTTAATGGAGCTTCATTTACTGGGGCTGTTTTCAATTTGTCCACCACAGTTATTGGTGCTGGGATCATGGGCTTGCCTGCTTGCGTCAAAAAATTGGGAATGGTGCCTGGCCTTCTTGCCATAATCCTAACAGCATTATTGACAGAGAAGGCAATTGAGTTCATGATCAGGTTTTCAAGGGCAGGGAATATTTCTTCCTATGGAAGTCTTATGGGGGATGCCTTTGGGAAATACGGAAAAGCTTCGGTAGAGTTATGTATCGTAATCGGTAACATTGGTATTCTTATTGTTTACATGATCATTATTGGTGATGTGATTTCTGGAACAACTTCAAGTGGAATTCACCATTCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGGCGTACATTTGTTATTGTTTTCACAACACTCGCTGTGTTTGCACCTTTGGTCAGCCTCAAGCGAATTGATTCATTGAGATTCACATCTGCATTGTCAATTGGATTAGCAGTCGTTTTCCTTGTCATTGCTGCGGGGATCTCAATTATCAAGATTTTTAGTGGAGGCATTGGGATGCCTAGACTCTTCCCCATCATTACTGATGCAGCCTCGGTTCTTGATCTATTCACTGTAGTTCCGGTGCTGATGACAGCCTACATCTGTCACTACAATGTTCATAACATAGATAATGAACTGGAGGATTCCTCACAGATGCGTGGGGTTGTGCGCGCTTCCCTTACTCTATGCTCTTCAGTGTATGTACTGACAAGCTTCTTTGGGTTCCTTCTATTTGGCGAAGGAATTCTTGATGACGTGCTTGCCAATTTTGATGCTGATCTTGGAATTCCTTTCGGTTCTGCACTCAATGATGCTGTTCGTTTTAGCTATGCTGCGCATCTTGTGCTTGTATTTCCTGTAGTGTTCTATGCAGTGAGGGTCAACATAGATGGTCTCATATTTTCCTCATCAAGAAGGCCTTTGCTTGTTGATAACTTCAGATTTGCATCAATTACTATTGCCCTTGTTGGCACTATCTTCTTGGGAGCAAATTTCATACCTAACATTTGGGTAATTTTCCAGTTCGCTGGAGCAACAAGTTCTGTTTGTATAGCTTTCATATTTCCAGCCGCAATCACTCTGAGGGATCGTTACAACATAGCAACTAAAACTGACAGGATTATGTCTCTCCTTATGATAGTCCTTGCAGTCTTGTCAAATGCTATAGCTATATACAGTGATGCCTATGCTTTGATCAACAAGAAAAAAACTTAA 1386 0.417 MTIGTLAPKADNKKPRKKKEVVDENAPLLPKTQETDAEFHEFNGASFTGAVFNLSTTVIGAGIMGLPACVKKLGMVPGLLAIILTALLTEKAIEFMIRFSRAGNISSYGSLMGDAFGKYGKASVELCIVIGNIGILIVYMIIIGDVISGTTSSGIHHSGILEGWFGVHWWTGRTFVIVFTTLAVFAPLVSLKRIDSLRFTSALSIGLAVVFLVIAAGISIIKIFSGGIGMPRLFPIITDAASVLDLFTVVPVLMTAYICHYNVHNIDNELEDSSQMRGVVRASLTLCSSVYVLTSFFGFLLFGEGILDDVLANFDADLGIPFGSALNDAVRFSYAAHLVLVFPVVFYAVRVNIDGLIFSSSRRPLLVDNFRFASITIALVGTIFLGANFIPNIWVIFQFAGATSSVCIAFIFPAAITLRDRYNIATKTDRIMSLLMIVLAVLSNAIAIYSDAYALINKKKT 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00622 461 Pfam Transmembrane amino acid transporter protein 45 450 IPR013057 -
Trre11g00622 461 PANTHER AMINO ACID TRANSPORTER 40 443 - -
Trre11g00622 461 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00622 Trre-Chr11 4984006 4988599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00622 18 459 Amino Acid or Auxin Permease AAAP Family AT5G38820 63.964 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00622 K14207 - gmx:100791286 702.205