Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00621 ATGACAATTGGAACTATAACACCTGAGAAGAGGAAAACAAGGAAGAACAAAGAAGTTGTTGATGAGAATGCACCTTTGGTACCGAAGTCTCAAGAGACAGATACCGAGTTACATGAATTTAATGGAGCTTCATTTTCTGGAGCTGTGTTTAATTTGTCAACGACAATTATTGGTGCTGGAATCATGGGCTTGCCTGCTTGTGTTAAGAAATTGGGCATGGTTCCTGGTCTAATTGCGATAGTGTTAACGGCTTTATTGACAGAGAAGTCGATTGAGTTCATGATCAGGTTTTCGAGGGCAGGAAATCTTACTTCCTATGGAAGTCTTATGGGGGATGCTTTTGGGAAATATGGAAAAGCACTTGTGGAGATATGTGTTGTAATCAATAACACTGGAATTCTGATTGTTTACATGATTATTATTGGTGATGTGATTTCTGGAACAACTTCAAGTGGAATTCACCATCCTGGTATCCTTGAAGGATGGTTTGGTGTTCATTGGTGGACTGGGCGTACATTCGTTCTTGTTTTTACGACACTTGCTGTGTTTGCACCTCTGGTTAGCTTTAAGCAAATTGATTCATTGAGATTTACATCTGCATTATCAGTTGGATTAGCAATTGTTTTCCTTATCATTGCTGTGGGGATCTCAATTATCAAGATTATTAGCGGAGGCATTGGGATGCCCAGACTCTTCCCGGTCATTACTGACGCTGCTTCAGTTTTTGATCTATTCACCGTAGTTCCCGTGCTGGTGACCGCTTATATCTGCCACTACAATGTTCACAACATAGATAATGAACTGGAGGATTCCTCATGGATGCACGGTGTTGTGCGTACTTCCCTCACTCTATGCTCGTCAGTTTACATACTGACAAGCTTCTTTGGGTTCCTCCTATTTGGTGACGATACTCTTGATGACGTTCTTGCCAATTTTGATACTAATCTTGGACTTCCTTTCGGTTCTGCGCTCAATGATGCTGTTCGTTTTAGCTATGCTGCCCATCTCGTGCTTGTATTTCCTGTAGTTTTCTATGCGTTGAGGGTCAACATAGATGGTCTCATATTTTCCTCTTCAAGCAGGCCTTTGGTTGTTGATAACTTCAGATTTGCATCAATTACTATTGCCCTTGTCGGCAGTATTTTCATCGGAGCAAATTCCATACCTAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTTCTGTTTGTGTAGGATTCATATTTCCAGCTGCAATCACTCTAAGGGATCATTACAACATAGCAACTAAAACAGACAAGATTCTGTCTGTCTTTATGATAGTTCTTGCCGTCTTGTCAAATGCCGTGGCTATATACAGTGATGCCTATTCCTTGATCAACAAGAATAAAACTTAA 1380 0.408 MTIGTITPEKRKTRKNKEVVDENAPLVPKSQETDTELHEFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLIAIVLTALLTEKSIEFMIRFSRAGNLTSYGSLMGDAFGKYGKALVEICVVINNTGILIVYMIIIGDVISGTTSSGIHHPGILEGWFGVHWWTGRTFVLVFTTLAVFAPLVSFKQIDSLRFTSALSVGLAIVFLIIAVGISIIKIISGGIGMPRLFPVITDAASVFDLFTVVPVLVTAYICHYNVHNIDNELEDSSWMHGVVRTSLTLCSSVYILTSFFGFLLFGDDTLDDVLANFDTNLGLPFGSALNDAVRFSYAAHLVLVFPVVFYALRVNIDGLIFSSSSRPLVVDNFRFASITIALVGSIFIGANSIPSIWDIFQFTGATASVCVGFIFPAAITLRDHYNIATKTDKILSVFMIVLAVLSNAVAIYSDAYSLINKNKT 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00621 459 PANTHER AMINO ACID TRANSPORTER 39 441 - -
Trre11g00621 459 MobiDBLite consensus disorder prediction 8 22 - -
Trre11g00621 459 Pfam Transmembrane amino acid transporter protein 43 446 IPR013057 -
Trre11g00621 459 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00621 Trre-Chr11 4978490 4981226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00621 3 457 Amino Acid or Auxin Permease AAAP Family AT3G30390 64.615 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00621 K14207 - gmx:100791286 733.021