Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00603 ATGCTCAAAACGCTTGATAGGTACCAAAAGTGCAGCTATGGAGCAGTAGAAGTCAACAAACCTGCCAAAGAGCTTGAGAACAGTTACCGTGAGTACTTGAAGCTGAAAGCAAGATTTGAATCTCTTCAAAGGACCCAAAGAAACCTTCTTGGTGAAGACTTGGGTCCATTAGGTACCAAAGATCTTGAGCAGCTTGAACGCCAACTTGATTCATCTCTCAAGCAAGTCAGGTCCACCAAGACCCAATTCATGTTGGACCAATTAGCTGATCTTCAAAATAAGGAGCACATGTTGGTAGAAGCAAACAGATCTTTGACTATGAAGCTGGAAGAAATGAATATCAATACAAGAAATCAGTATAGGCAAACATGGGAAGCTGGTGATCAAAGTATGGCATATGGTAATCAAAATGCTCACTCACAAAGCTTCTTCCAGCCTTTGGATTGCAATCCAACATTGCAGATAGGGACTGATTACAGGTACAGTCCAGTAGCTTCAGATCAGCTAACTGCTGCAACAACTCAAGCTCAACAAGTTAATGGATTTATTCCTGGATGGATGCTTTAA 567 0.4145 MLKTLDRYQKCSYGAVEVNKPAKELENSYREYLKLKARFESLQRTQRNLLGEDLGPLGTKDLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEANRSLTMKLEEMNINTRNQYRQTWEAGDQSMAYGNQNAHSQSFFQPLDCNPTLQIGTDYRYSPVASDQLTAATTQAQQVNGFIPGWML 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00603 188 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre11g00603 188 Pfam K-box region 23 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre11g00603 188 Coils Coil 22 45 - -
Trre11g00603 188 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00603 Trre-Chr11 4790144 4793652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00603 1 188 MADS-box Gene Family AT5G15800 64.677 3.42e-79 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00603 K09264 - gmx:100785322 333.954