Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00591 ATGAGGCTTTGTTTTTCATTTCTTTGTGTTCTTGTGATATCCTCTTATGCAGTTGCTTATGATCCAAAGGATCCAAATGGAAACATAACTATAAAATGTGATGTTATTGCATGGACACCAGATGGTTATGTGGCGATGGTAACAATCAACAATTTCCAAAAGTTTCGACAAATAAAGAATCCGGGATGGACATTAGGATGGACTTGGGCTAAGAAAGAAGTTATATGGGATATGCTAGGAGCTCAAACAACAGAACAAGGTGATTGTTCTAGATTCAAAGGAAACATACCTCATTCCTGCAAGAAAATCCCTACAGTTGTAGACCTTCTCCCAAGTGTATCTTACTATCGGCAAGTCCCAAACTGTTGTAAAGGCGGTGTGGTTGCAGCATTGGGACAATCAGCTTTTGAAGCTAGTATAGGACAAGCTGGTAACACAACCAAAACAGTTAGAATTCCACAGAATTTTACTCTTTTGGCTCCACGAGCTCGATATACTTGTCGCCCTGCAAACATTGTTCCTGATAGGCGCCGCACGACTCGAGCTCTCATGACATGGGATGCTATCTGCAAATATGCAAAAGGTTAA 588 0.4082 MRLCFSFLCVLVISSYAVAYDPKDPNGNITIKCDVIAWTPDGYVAMVTINNFQKFRQIKNPGWTLGWTWAKKEVIWDMLGAQTTEQGDCSRFKGNIPHSCKKIPTVVDLLPSVSYYRQVPNCCKGGVVAALGQSAFEASIGQAGNTTKTVRIPQNFTLLAPRARYTCRPANIVPDRRRTTRALMTWDAICKYAKG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00591 195 PANTHER PROTEIN COBRA 6 193 IPR006918 GO:0010215|GO:0016020
Trre11g00591 195 Pfam COBRA-like protein 43 192 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00591 Trre-Chr11 4673888 4675326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00591 17 194 COBRA Gene Family AT5G15630 64.921 2.14e-87 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00591 - - gmx:100798678 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre13g00333 13 2541788 2545192 Trre11g00591 11 4673888 4675326 PCT