Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00590 ATGAGGCTTATTTTTTCATTTCTTTGTGTTCTTGTGCTATCCTCTTATGCAATTGCTTATGATCCTTTGGATCCAAATGGCAACATAACAATAAAATGGGATGTTATGTCTTGGACACCAGATGGTTATGTGGCGACAGTAACGATCAACAATTTTCAAATGTTTCGACATATAATGAATCCGGGATGGACCTTAGGCTGGACTTGGGCTAAGAGAGAAGTGATATGGTCAATGGTAGGAGCTCAAACAACAGAACAAGGTGATTGTTCTAGATTCAAAGGAAACATACCTCATTGCTGCAAGAAAATCCCTACAGTTGTAGACCTTCTCCCCGGTGTACCTTACAATCAGCAATTCGCAAACTGTTGTAAAGGTGGAGTTGTTTCAGCATGGGGACAAGATCCTACACAATCAGTATCAGCTTTTCAAGTTAGCATAGGACAAGCCGGAACCTCAAACAGAACAGTTAAACTTCCGAAGAATTTCACTCTTTTGGCTCCAGGACCCGGATATACTTGTGGCCCTGCCAAGATTGTTCCGTCCACCAATTTTCTTACTACTGATAGGCGCCGCAAAACTCAAGCTTTGATGACATGGAATGTTACATGTACTTACTCGCAATTTCTAGCACGAAAGAATCCAAGTTGTTGTGTATCTTTATCTTCCTTCTACAATGAAACCATTACACCTTGTCCCTCTTGTGCATGTGGCTGCCAAAACAAGAAGAATTGTGTGAAGAATGATGCTAAGATTCTGAGTATGGTAGGAGTTCATACTCCAAAGAAAGACAATGAACCATTGATGCAGTGCACTCATCATATGTGCCCAATTAGAGTTCATTGGCATGTGAAGAATAACTATAAGGACTATTGGCGAGTCAAAATTGTGGTAACAAATTTTAATTACAGGATGAATTACTCTCTCTGGAGTCTTGCTATTCAACATCCAAATCTCAACAATGTTACTCAAGTTTTCAGTTTTAATTATAAGCCACTTCTACCCTATGAATCCATAAATGACACTGGAATGTTCTATGGCATGAAATACTTCAATGATCTACTAATGGAAGCTGGACCAAAAGGAAATATTCAATCAGAGGTATTACTTCAGAAAAACCAAGATACCTTCACATTCAAGCAAGGATGGGCATTTCCTCACAAGGTTTACTTTAATGGTGATGAATGCATGCTTCCTCCACCCGATACCTACCCTTTTCTCCCAAATTCTTCCCCGGCAAGCCTACTTACCTTCAAGGCACTCATCTTTTCATTACTTTTACTGATAGCAGTTTTGTGA 1296 0.3958 MRLIFSFLCVLVLSSYAIAYDPLDPNGNITIKWDVMSWTPDGYVATVTINNFQMFRHIMNPGWTLGWTWAKREVIWSMVGAQTTEQGDCSRFKGNIPHCCKKIPTVVDLLPGVPYNQQFANCCKGGVVSAWGQDPTQSVSAFQVSIGQAGTSNRTVKLPKNFTLLAPGPGYTCGPAKIVPSTNFLTTDRRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPSCACGCQNKKNCVKNDAKILSMVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKNNYKDYWRVKIVVTNFNYRMNYSLWSLAIQHPNLNNVTQVFSFNYKPLLPYESINDTGMFYGMKYFNDLLMEAGPKGNIQSEVLLQKNQDTFTFKQGWAFPHKVYFNGDECMLPPPDTYPFLPNSSPASLLTFKALIFSLLLLIAVL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00590 431 PANTHER PROTEIN COBRA 6 424 IPR006918 GO:0010215|GO:0016020
Trre11g00590 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Trre11g00590 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00590 Trre-Chr11 4666102 4668827 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00590 19 431 COBRA Gene Family AT3G02210 66.029 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00590 - - gmx:100798678 824.698