Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00589 ATGTTGTTCTTCCCTTTCCTTAAACCTTGTCCATGCATGCTTTTGTTCCTTTTCTTTACGCTGTTCTACACTTCAACAGAAGCATATGATCCACTTGACCCGTATGGAAATATCACAATCAAATGGGACGTAATGCAATGGGAACCTGATGGTTATCTTGCTATTGTTACGATGAACAACTTCCAACAGTATCGCCATATATCAGCACCTGGATGGTCCTTAGGTTGGACTTGGGCCAAGAAGGAGGTAATATGGTCGGTGGTGGGAGGACAGACTACTGAACAAGGAGACTGTTCAAAGTTTAAGGGAAACACCCCACATTGCTGTAAAAAAGACCCAACTGTTGTAGATTTACTTCCCGGAGCGCCGTATAATCAACAAATAGCAAATTGTTGTAGAGGTGGTGTACTCAGCTCGTGGGCACAAGATCCAATAAATGCAGTCTCGGCGTTTCAACTCAGCGTCGGTAGTGCTGGCACTACTAACAAAACCGTCAAACTACCACAAAATTTCACCTTGAAAGCTCCAGGACCAGGCTATACATGCGGACCAGCAAAAATTGTGAGTCCTACTAAATTTATGACAGCGGACAAAAGGAGAGTGACTCAAGCACTTATGACATGGAATGTGACATGCACATATTCACAATTTCTTGCTCAGAAAACTCCAACTTGCTGTGTCTCCCTCTCGTCTTTCTATAACGATACAATTGTACCCTGCCCGACATGTTCGTGTGGATGCCAAGGCAACTCAGCTCAATCAGGAACCTGTGTAGATCCAAGTGCATCACATTTGGCTTCAGTTGTTAACGGCCCCGGAAATAAAAGTATTATGCCTTTGGTTCGATGTACAAGTCATATGTGTCCGATCAGAGTTCACTGGCACATTAAACTTAACTACAAAGAGTATTGGCGTGTGAAGGTTACTGTTACTAATTTCAATTACAGGATGAATTACTCAGATTGGAACTTGGTCGTGCAACATCCAAACTTTGACAATCTGACTCAACTTTTCAGTTTCAACTACAAATCAATAAATCCCTACGGGTCGATAAATGATACAGCAATGCTTTGGGGTGTTAAATTCTACAACGATTTCCTCAATCAAGCTGGTCCTAATGGTAATGTACAATCAGAGCTACTTTTCCGAAAGGATGATTCTTTTATGTTCGACAAGGGTTGGGGATTTCCTCGGAGGATCTATTTCAATGGTGATGACTGTGTGATGCCACCACCTGATGCTTATCCATGGTTACCCAATGCTGGTTCGAAGCACGATGTTTCCTTCCTTACTTTGTTGATGGCTTCGTTGGCTTCATTGGTAGTCTTAGTACTTCACGCATATTGTTAA 1350 0.4244 MLFFPFLKPCPCMLLFLFFTLFYTSTEAYDPLDPYGNITIKWDVMQWEPDGYLAIVTMNNFQQYRHISAPGWSLGWTWAKKEVIWSVVGGQTTEQGDCSKFKGNTPHCCKKDPTVVDLLPGAPYNQQIANCCRGGVLSSWAQDPINAVSAFQLSVGSAGTTNKTVKLPQNFTLKAPGPGYTCGPAKIVSPTKFMTADKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCQGNSAQSGTCVDPSASHLASVVNGPGNKSIMPLVRCTSHMCPIRVHWHIKLNYKEYWRVKVTVTNFNYRMNYSDWNLVVQHPNFDNLTQLFSFNYKSINPYGSINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDDSFMFDKGWGFPRRIYFNGDDCVMPPPDAYPWLPNAGSKHDVSFLTLLMASLASLVVLVLHAYC 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00589 449 PANTHER PROTEIN COBRA 16 436 IPR006918 GO:0010215|GO:0016020
Trre11g00589 449 Pfam COBRA-like protein 52 215 IPR006918 GO:0010215|GO:0016020
Trre11g00589 449 PIRSF COBRA 2 448 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00589 Trre-Chr11 4662178 4664868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00589 14 447 COBRA Gene Family AT3G02210 73.624 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00589 - - gmx:100783820 788.489