Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00587 ATGGCACAACAAGAAGAACCATTCAAAGTTGTTGAAGTTTGCAATGTTGAACCATTTGATGGACCAACAAAACCTTCTCAATCAGCACCAACCTCACTTCCCCTCACTTTCTTTGATCTTTTATGGTTAAGATTTCCACCAGTTGAATATCTCTACTTCTATGAACTCACAAACTCAACCACTTTTTTCTATGAAACTCTTCTTCCAAATCTCAAACACTCACTTTCACTCACACTTCAACACTTCCTCCCTTTAGCTGGAAACATAACTTGGCCAGTTGATTCAACCAAACCAATCATAAACTATGTTCGCGGCGATTCTGTTTCCTTCACTATTGTTGAGTCCAAATCAAGTTTCAAAGATATTTCTTCACATCATTGTGAAGCTTCACAAAGACATCACTTGATACCACTTTTGAAAACTTGTCATGAAAAAGCTTCTTTGATTTCAATTCAAGTTACTTTGTTTCCAAACAAAGGTTTTTGCATTGGAATAACAACACACCATGTTGCTTTAGATGGAAAGTCTGCTACAGATTTTATGAAATCATGGTCCTATATTACATGTTCTATTTCTAACCTTGATTCATCTTTATCATTGTTATTATTACCTGAAAATCTGACACCTTTTTTTGATAGATCATTGATACAAAATCATAATAATGGAATTGGAATCAGTGAAACATATGTTGTTGATATTATGAAACAAGGTGGACCAAACAATAAAAGTGTTAAGGTTATAGATTTTCCTAGTACATTGAAAAATGATGCAATTAAAAGCTTATTTGAATTAACACCTTCAAATATTCAAAAGCTTAAGCAACATGCAAAAAATAAGATGAAAATGAATGTTACAAATTTGTCAACATTTTCAGTTACATGTGCTTATGTGTTATCATGTTTAGCAAAAGCAGAACAACCAATGGATGAAAAAGTGATTTTAATATTTGCTGTTGATTGTAGAACAAGATTGAACCCTCCAATTTCTTCTATGTATATTGGAAACTGTGTTGCAGGTCAAAAGGTTGAGCTTGAGCCAAAGAAATTAGTTGGAAAAGATGGATTTTTATGTGCTTTAGAAAAGGTAACTGAAGGTTTGAATAAGGTGAAAAATGATGGAGTGTTGAATGGAGCTGAAAATTGGGCAAATGATATGTTTAATGGTAATGAGACCATTAAATACTCTATTACTGGATCACCAAAGTTTGAAGTTTACAGTATTGATTTTGGATTTGGAAAGCCTAAAAAAGTTGATATTACTTCAGCTGATAAGACAGGAGCATTTTCTCTTAGTGAAAGTAGGAATAATGATGGTGGAATTGAGATTGGTTTGGCTTTGAATAAGCAAGAGATGGAAGCTTTTTCTACCCTTTTTGTTCAAGGACTTGAATCCATTTAA 1398 0.329 MAQQEEPFKVVEVCNVEPFDGPTKPSQSAPTSLPLTFFDLLWLRFPPVEYLYFYELTNSTTFFYETLLPNLKHSLSLTLQHFLPLAGNITWPVDSTKPIINYVRGDSVSFTIVESKSSFKDISSHHCEASQRHHLIPLLKTCHEKASLISIQVTLFPNKGFCIGITTHHVALDGKSATDFMKSWSYITCSISNLDSSLSLLLLPENLTPFFDRSLIQNHNNGIGISETYVVDIMKQGGPNNKSVKVIDFPSTLKNDAIKSLFELTPSNIQKLKQHAKNKMKMNVTNLSTFSVTCAYVLSCLAKAEQPMDEKVILIFAVDCRTRLNPPISSMYIGNCVAGQKVELEPKKLVGKDGFLCALEKVTEGLNKVKNDGVLNGAENWANDMFNGNETIKYSITGSPKFEVYSIDFGFGKPKKVDITSADKTGAFSLSESRNNDGGIEIGLALNKQEMEAFSTLFVQGLESI 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00587 465 Gene3D - 4 233 IPR023213 -
Trre11g00587 465 PANTHER - 9 464 - -
Trre11g00587 465 Pfam Transferase family 22 455 - -
Trre11g00587 465 Gene3D - 254 465 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00587 Trre-Chr11 4645930 4647327 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00587 51 460 Monolignol Biosynthesis Gene Families AT5G48930 25.059 1.18e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00587 - - mtr:25495413 632.869