Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre11g00583 ATGGCACAAGAATCATTCAAAGTTATTGAAGTTTGCAACATTGAACCATATCATGAACCAACAAAACCTTCTCAATCACCAACCTCACTTCCACTAACTTTCTTTGATCTTCTATGGCTAAGATTTCCACCAGTTGAACGTCTCTTCTTCTATGAATTCACAAACTCAACCACTTTTTTCTATGAAACTTTTCTTCCAAATCTCAAACACTCACTTTCACTCACACTTCAACACTTTCTCCCTTTCGCCGGGAACATAGTTTGGCCTATTGGTTCATCGAAACCAATCATAAACTACGTTCCCGACAATTTTGTTTCCTTCACGGTTGTCGAGTCGAACTCAAGTTTCAAAGATCTTTCCTCTAATCATTGTGAATCTTCAAAAAGACATCATTTGATACCCCTTTTGAATACTTCACATGAAAAAGCTTCTTTGGTTTCATTTCAAGTCACTTTGTTTCCAAATAATGGTTTTTGCATCGGCATTACAACACATCATGCTGGTTTAGATGGAAAATCTTCAACAAATTTTATGAAATCATGGTCTTATATTACATGTTCTAATTCTAATCTTGATTCATCTTTTTTATCTTTACCTGAAAATCTAACACCTTCTTTTGATAGATCATTGATAGAAGATCAATATAATGGTGAAGCATATGGTTATGCTTGGATGAAACATGGTGGACCAAATAATAAAAGTCTCAAAGTTTGGGATTCTTATGGTACATCAAAAAATGATGCAATCAAAAGTTTATTTGAATTGACACCTTCAAATATTCAAAAGCTTAAAGCATATGCAAAAAATGAAGTGAAAATGAATGTTACAAATTTGTCAACTTTTTCAATTACTTGTGCTTATTTGTTATCATGTTTAGTAGAAGTAGAAAAACCAAAGGAAGAAAAAGTGATTTTCATATTTACTATTGATTGTAGAACAAGAATGGATCCTCCAATTTCTTCTATGTATATTGGAAATTGTATTACAGGACAAAAAGTTGAGCTTGAGCCAAAGAAATTTATTGGAAAATTAGATGGATTTTTAAGTGCTTTAGAAGGGATGAATGAAGGTTTGAATAAGGTGAAAAATGAAGATGTGTTGAATGGAGTTGAAAATTGGTTAGATCATATGTTTGATGTTAATGAAAGTACTAAACTATATTCTATTGCTGGATCACCAAGGTTTGAAGTTTATGGTATTGATTTTGGATTTGGAAAGCCTAAAAAAGTTGATATGACTTCAACAGATAAAACAGGAGCATTTTCTCTTAGTGAAAGTAGGAATAATGATGGTGGAGTTGAGATTGGTTTGGCTTTGAATAAGCAAGAGATGGAAGCTTTTTCTACCCTTTTTGTTCAAGGACTTGAATCCATTTAA 1377 0.3232 MAQESFKVIEVCNIEPYHEPTKPSQSPTSLPLTFFDLLWLRFPPVERLFFYEFTNSTTFFYETFLPNLKHSLSLTLQHFLPFAGNIVWPIGSSKPIINYVPDNFVSFTVVESNSSFKDLSSNHCESSKRHHLIPLLNTSHEKASLVSFQVTLFPNNGFCIGITTHHAGLDGKSSTNFMKSWSYITCSNSNLDSSFLSLPENLTPSFDRSLIEDQYNGEAYGYAWMKHGGPNNKSLKVWDSYGTSKNDAIKSLFELTPSNIQKLKAYAKNEVKMNVTNLSTFSITCAYLLSCLVEVEKPKEEKVIFIFTIDCRTRMDPPISSMYIGNCITGQKVELEPKKFIGKLDGFLSALEGMNEGLNKVKNEDVLNGVENWLDHMFDVNESTKLYSIAGSPRFEVYGIDFGFGKPKKVDMTSTDKTGAFSLSESRNNDGGVEIGLALNKQEMEAFSTLFVQGLESI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre11g00583 458 PANTHER - 6 457 - -
Trre11g00583 458 Pfam Transferase family 20 448 - -
Trre11g00583 458 Gene3D - 245 458 IPR023213 -
Trre11g00583 458 Gene3D - 2 226 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre11g00583 Trre-Chr11 4631361 4632737 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre11g00583 36 447 Monolignol Biosynthesis Gene Families AT5G48930 22.454 5.74e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre11g00583 - - cam:101513090 635.18